DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and Fatp1

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster


Alignment Length:662 Identity:130/662 - (19%)
Similarity:243/662 - (36%) Gaps:142/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNC 111
            :|..:.:|.|..:.|..|:.::..:     .|::|..:..::||......|.::...|.:|..|.
  Fly   177 TVADVFERNVQAHPDKVAVVSETQR-----WTFRQVNEHANKVANVLQAQGYKKGDVVALLLENR 236

  Fly   112 AEWFYSAMGAIHARGIIAGIYTTN-SADAVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKA 175
            ||:..:.:| :...|:|..:..|| ...::.|.:..:|...::..:    |.:.|:.|....|.|
  Fly   237 AEYVATWLG-LSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGE----DFLEAVTDVAKDLPA 296

  Fly   176 AIQI-----------QEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYT 229
            .:.:           .|...|..|..:.....:..|..|.:.|..           ::....:||
  Fly   297 NLTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEKPNKTQVNH-----------HDKLVYIYT 350

  Fly   230 SGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSY--LPLSHVA------------AQT 280
            |||.|:||..::||....|...||...|.    ..|..:.|  |||.|.|            ..|
  Fly   351 SGTTGLPKAAVISHSRYLFIAAGIHYTMG----FQEEDIFYTPLPLYHTAGGIMCMGQSVLFGST 411

  Fly   281 VDIYTCAFVAGCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKML 345
            |.|.. .|.|. .:|||......|:.:.:.:.  .|::...:..|..|:..|.:...:|...::.
  Fly   412 VSIRK-KFSAS-NYFADCAKYNATIGQYIGEM--ARYILATKPSEYDQKHRVRLVFGNGLRPQIW 472

  Fly   346 ASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMS-----PETK 405
            ..:.:...:.......|.:.|.     |..:.......|:||  |..:.....|:|     |:|.
  Fly   473 PQFVQRFNIAKVGEFYGATEGN-----ANIMNHDNTVGAIGF--VSRILPKIYPISIIRADPDTG 530

  Fly   406 KYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANGHGELCIRGRHV 470
            :       .|.|..|:.:      :|.|:..|: .|||.:.|..|:                  .
  Fly   531 E-------PIRDRNGLCQ------LCAPNEPGV-FIGKIVKGNPSR------------------E 563

  Fly   471 FMGYIDNKEKTEESLDD-----DCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIEN 530
            |:||:|.|...::.:.|     |....||||...|:|||:....|:.: .....|||:....:|.
  Fly   564 FLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGD-TFRWKGENVSTSEVEA 627

  Fly   531 TIKKELDAISNAFLVG------EQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHK 589
            .: ..:....:..:.|      |.|..:..:...:.|:|.|             |:..||     
  Fly   628 QV-SNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPERELDLD-------------VFAASL----- 673

  Fly   590 TVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDF---SIPTGELGPTLKVKRN 651
              :.:|.|...|::       |:...|..::...|::|..:....:   :|.......|.|.:..
  Fly   674 --AKVLPAYARPQI-------IRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGRYE 729

  Fly   652 VVSKMYADEIEK 663
            :::....|::::
  Fly   730 LLTPQVYDQVQR 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 130/662 (20%)
ACSBG_like 69..665 CDD:213299 125/640 (20%)
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 130/662 (20%)
hsFATP4_like 199..712 CDD:213305 121/609 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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