DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and acs-3

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_503540.1 Gene:acs-3 / 178677 WormBaseID:WBGene00020343 Length:653 Species:Caenorhabditis elegans


Alignment Length:709 Identity:151/709 - (21%)
Similarity:306/709 - (43%) Gaps:111/709 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTIDALYNR--PGPNRLRQADAYRTTNRQDAVKIRMAKDGIGAEEPI--SVPGLLKRTVNNYGD 61
            |.|...|::|  .||.|:|::             :::.|...|..:.|  :|..:|.|:.....:
 Worm     6 MLTHPELFSRLVDGPERIRES-------------VQVPKPITGCPDGITKTVWDVLTRSAQLNPN 57

  Fly    62 YPAL-RTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHS----VGVLAFNCAEWFYSAMGA 121
            .|.. .:.||::.|  .||::..::...:....:.: ::::.|    :|:...:..::.::..| 
 Worm    58 APLFGESVNGRHVY--TTYREAVEEATIIGSGIVAI-MQKNQSTNKLIGIAGIHSRKYMHTMHG- 118

  Fly   122 IHARGIIAG-------IYTTNSADAVQHVLESSHAQIVVVDDAKQMDKI--HAIRDKLPKLKAAI 177
                  |:|       :|..:..:.:..::::...:|:..::||:.:..  ..:.|:|..||..|
 Worm   119 ------ISGFDLTTVPLYHQSKLETLCDIIDNCKLEIIFCENAKRAEGFLSSKLGDRLRSLKTLI 177

  Fly   178 QIQEPYSPYLKKEDGYYRWSEIESMNVSDVED--------QYMTRLENVAINECCCLVYTSGTVG 234
            .:.:  :..|:|.|      ::|.|::.:.::        ....:.|...:     :.:||||.|
 Worm   178 ILDK--TTTLQKHD------DVEVMSLDEFKEIGKRNKRNPVKPKPETTYV-----ICHTSGTTG 229

  Fly   235 MPKGVMLSHDNITFDVRGIVKAMD---RVVVGAE-SIVSYLPLSHVAAQTVDIYTCAFVAGCIWF 295
            .||||.:||.::...|.||..:..   :...|.| :..|:|.|:|:....:...|       |:|
 Worm   230 RPKGVEMSHGSLVTSVSGIFTSWTIAYKWKFGLEDTYFSFLSLAHIYEHLIQTLT-------IYF 287

  Fly   296 ADK----DALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKH 356
            ..|    |....||:..:|...||....|||:..|..|.:....:..|.:.:.|..:||....:.
 Worm   288 GGKIGIYDGNTATLIPQIQKLEPTIVSLVPRLLNKLYEAVHDGVAKKGFIARKLFDYAKKTKARQ 352

  Fly   357 YMVSQGKSSGGFRY-KIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYF-LSLDLKIVDAF 419
            .      ..|..|| .....::..|:|..|| .::..|.|..||::.|.|.:. .:....:|:.:
 Worm   353 L------QRGVLRYDTFFDKIVFKKLKLMLG-GKLKVLTSGGAPITKEVKTFTRYAYGCPLVEGY 410

  Fly   420 GMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINK------DANGHGELCIRGRHVFMGYIDNK 478
            |.:|.:...|:.||.......:|...|..:.|.::.      ..|..||:|.||..:..||..:.
 Worm   411 GQTECSAAGTLTLPWDTTYGNVGGPAPWAQVKLVDVPEKNYFSMNDEGEVCFRGNAMMTGYFQDP 475

  Fly   479 EKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAF 543
            |.|.:::|.:.|||:||:|.....|.:.:..|..|:...:.|:.:.|:.|| .|......|:..:
 Worm   476 ELTAKTIDSEGWLHTGDIGKWLPTGGLQIIDRKNEMFKLSQGDFVSPIQIE-AIYANSPLITQIY 539

  Fly   544 LVGE-QRKYLTVLITLKTEVDKDSGEPL-DELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKS 606
            :.|: :|.:|..::.|  ::.:....|| ..|..:.|:   .:.:|:|.|.:.:           
 Worm   540 VTGKTERSFLVGIVVL--DLPRFKQLPLVKALDGKESI---EMIMENKEVKNAV----------- 588

  Fly   607 IEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            |.:..|.|.:..:...:.::...:...:|:...|.:..|||.:|.::...:|.:|.|:|
 Worm   589 IAELNKYAKQNGLQTIELIRNVHLTLQEFTEENGLITSTLKNRRKILEDYFAPQIAKMY 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 143/676 (21%)
ACSBG_like 69..665 CDD:213299 135/634 (21%)
acs-3NP_503540.1 LC-FACS_euk 67..648 CDD:341250 135/635 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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