DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and acs-18

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_501893.1 Gene:acs-18 / 177918 WormBaseID:WBGene00011173 Length:700 Species:Caenorhabditis elegans


Alignment Length:624 Identity:150/624 - (24%)
Similarity:274/624 - (43%) Gaps:68/624 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLE--EHHSVGVLAFNCAEWFYSAMGAIHARGIIAG 130
            |:||..:..::|.|..:.....::|..|||:|  |...:|:.:.|..||..|.|...:...:...
 Worm   106 KDGKLEWEWISYDQAFETSDHASQAIRKLGIEIGEESKIGIYSNNRPEWILSEMAIHNFSNVSVP 170

  Fly   131 IYTTNSADAVQHVLESSHAQIVVVD---DAKQMDKIHAIRDK--LPKLKAAIQIQEPYSPYLK-- 188
            :|.|.:.|.:.::.......::.||   ..||:     ||||  |..||..:|..| .|..:|  
 Worm   171 LYDTITNDDMHYITNLCEISLMFVDAEIKTKQL-----IRDKSYLSSLKYIVQFNE-CSDDIKEM 229

  Fly   189 -KEDGYYRWS--EIESMNVSDVEDQYMTRL-ENVAINECCCLVYTSGTVGMPKGVMLSHDNITFD 249
             :|:.:..||  |...|........::... |.:|     .:.:||||.|.||||||:|.|:...
 Worm   230 ARENDFRLWSFNEFVEMGKKQKHRPHVPPTPETLA-----TISFTSGTTGRPKGVMLTHLNMCSA 289

  Fly   250 VRGIVKAMDRVVVGAESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKSLQDARP 314
            .....:..:...| .::.:|||||:|: .:.:.:.:...:...|.|:..|  ...||..:|...|
 Worm   290 TMSCEEFENEAGV-QDAYLSYLPLAHI-YERLCLLSNFMIGSRIGFSRGD--PKLLVDDVQALAP 350

  Fly   315 TRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMS 379
            ..|..||||.:|..:.::...... .||||:.:.|....|.||.:: ||::   |.......::.
 Worm   351 RSFATVPRVIDKIHKAVMKQVQDK-PLKKMILNAAIAYKLYHYKMT-GKAT---RKTWVDKYVLH 410

  Fly   380 KVKQALGFD-RVLTLASAAAPMSPETKKYFL-SLDLKIVDAFGMSETAGCHTICLPDSVGLNTIG 442
            |::..||.: |.|.|.:|.:.:|  ..::.. :..:::::.:|.:||:|..|:.|.....:..:|
 Worm   411 KIQMLLGPNIRQLILGAAKSDVS--AMRFARGAFGVEVLEGYGQTETSGPTTLQLVGDTRIGCVG 473

  Fly   443 KTLPGCESKFI-------NKDANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVD 500
            ..:.....|.|       :.|.|| ||:.::|.:|..||..|.|.|..|..:|.::.:||:|...
 Worm   474 PPMACAMIKLIDVPELGYSVDKNG-GEVLVKGHNVTSGYYKNPEATASSFTEDGYMKTGDIGRFT 537

  Fly   501 DKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKD 565
            .:|.:.:..|.|.:.....|:.:.| .:..::......:...::.|:..|...|.|.:.      
 Worm   538 AEGSLQIIDRRKNVFKMPQGKFVAP-DLTESLYTSSSFVQQIYVHGDMEKPWLVAIVVP------ 595

  Fly   566 SGEPLDELSHESSVWVKSLGVEHKTVSDI----LAAGPCPKVWKSIEDAIKRANKQSISNAQKVQ 626
              :|    .:.:|..:....:..||...:    :.|....:.:..:.:..||...:.:....   
 Worm   596 --DP----EYLASYALTKHNINGKTYEQLCNIPILADDVLRQFVELTEEDKRPRYEGVYGVH--- 651

  Fly   627 KFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
               :.|..||...|...||||.|||.:::.:..||:.:|
 Worm   652 ---LTPVAFSAENGLTTPTLKNKRNAIAQFFKAEIDGMY 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 150/624 (24%)
ACSBG_like 69..665 CDD:213299 148/621 (24%)
acs-18NP_501893.1 LC-FACS_euk 111..688 CDD:341250 147/619 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160544
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101481
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.640

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