DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and acs-5

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_499799.1 Gene:acs-5 / 176785 WormBaseID:WBGene00013575 Length:687 Species:Caenorhabditis elegans


Alignment Length:665 Identity:164/665 - (24%)
Similarity:286/665 - (43%) Gaps:119/665 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RTVNNYGDYPALRTK-NGKNGYHTVTYKQYEQKVHQVAKAFI-KLGLEEHH--SVGVLAFNCAEW 114
            :|.:|.|  |.:.|: :|...|..:||....::...::...: :.||...:  ::|:.|.|..:|
 Worm    83 KTESNGG--PCVGTRSSGDADYEFLTYDDVHEQAKNLSMTLVHEFGLTPANTTNIGIYARNSPQW 145

  Fly   115 FYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQI 179
            ..||:..:....::..:|.|..|:|...::..:...:|:||..|:.:.:...|:.:|.||..|.|
 Worm   146 LVSAVACVEQSMVVVPLYDTLGAEAATFIISQAEISVVIVDSFKKAESLIKNRENMPTLKNIIVI 210

  Fly   180 QEPYSPYLKKEDGYYRWSEIESM--------------NVSDVEDQYMTRLENVAINECCCLVYTS 230
            ..  :..||..........:||:              |:...:|.|:             :.|||
 Worm   211 DS--ADELKDGTAIIDTIRVESLTNALNLGSRYPFTNNLPKPDDNYI-------------ICYTS 260

  Fly   231 GTVGMPKGVMLSHDNITFDVRGIVK---AMDRVVVGAESI-VSYLPLSHVAAQTVDIYTCAFVAG 291
            ||.|.||||||:|.||..::.|.:|   |....::.|..: :|||||||:..|........|.:.
 Worm   261 GTTGTPKGVMLTHSNIVANISGFLKILFAFQPSMIDATQVHISYLPLSHMMEQLTHWTLLGFGSK 325

  Fly   292 CIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKH 356
            ..:|  :.:::| |...::..:||.|..|||:..:..:.:.:.....|.:.|::.::|  ...|.
 Worm   326 IGYF--RGSIQG-LTDDIKTLKPTVFPVVPRLLNRLYDAITSKVQQQGFMAKLVYNFA--FARKL 385

  Fly   357 YMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSP---ETKKYFLSLDLKIVDA 418
            .:|..||..   |..|...|:.:|::|.:| .:|..:.:.:||:|.   ||.:  ::|...||:.
 Worm   386 SLVKAGKVG---RDTIWDRLVFNKIQQQIG-GKVDLMVTGSAPISSTVLETCR--VTLGTTIVEG 444

  Fly   419 FGMSE--------------------TAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANGHGEL 463
            :|.:|                    .|.|..:.|.|...||...|              :|.||:
 Worm   445 YGQTECTALATFTWMGDPSTGHCGAPAPCALVKLGDVPDLNYFAK--------------DGKGEI 495

  Fly   464 CIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHI 528
            .|:|..|..||..:.|:|.|..|::.:|.:||:|.:...|.:.:..|.|.|...|.||.:.|..|
 Worm   496 RIKGPCVTKGYYKDPERTAELFDEEGFLQTGDIGEMLPNGTIRIIDRKKHIFKLAQGEYVAPEKI 560

  Fly   529 ENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGE--------PLDELSHESSVWVKSLG 585
            |..                   |:...:..:..||.||.|        |..::..|   |....|
 Worm   561 EQV-------------------YIRTPVVQQVYVDGDSLERWLIAVVVPEPDVLKE---WNDKQG 603

  Fly   586 VEHKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKR 650
            ...:.:.:|.......:...|...||.:|||  :::.::|:|..:....|::..|.|.||||.||
 Worm   604 SGSRKIEEICNDEKAKEFVLSELHAIGKANK--LNSIEQVKKVILTSDTFTVENGLLTPTLKAKR 666

  Fly   651 NVVSKMYADEIEKLY 665
            ..:...|.|.:.|:|
 Worm   667 PQLRLKYKDGMAKVY 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 164/665 (25%)
ACSBG_like 69..665 CDD:213299 158/647 (24%)
acs-5NP_499799.1 PLN02736 65..685 CDD:178337 164/665 (25%)
LC-FACS_euk 101..681 CDD:213293 157/643 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3416
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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