DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and Acsbg1

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_599216.1 Gene:Acsbg1 / 171410 RGDID:708557 Length:721 Species:Rattus norvegicus


Alignment Length:666 Identity:274/666 - (41%)
Similarity:410/666 - (61%) Gaps:25/666 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PNRLRQA------DAYRTTNRQDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGK 71
            |.:.|.|      :|..||.....|::|:  :....:.|.:|..:....::.||:..||..|. |
  Rat    63 PEKARAASLDASEEALWTTRADGRVRLRL--EPFCTQLPYTVHQMFYEALDKYGNLSALGFKR-K 124

  Fly    72 NGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNS 136
            :.:..::|.||.....:|||.|:|||||..|||.:|.||..|||:||:|.:.|.||:.|||||:|
  Rat   125 DKWERISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 189

  Fly   137 ADAVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIES 201
            .:|.|::.....|.::|||..||::||..|...||.|||.:..||| .|  ||....|...|:..
  Rat   190 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEP-PP--KKMANVYTMEELIE 251

  Fly   202 MNVSDVEDQYMTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMD--RVVVGA 264
            :.....|:.....::....|:||.|||||||.|.|||||||.||||:..|...:|.|  ...|..
  Rat   252 LGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDIQPAEVQQ 316

  Fly   265 ESIVSYLPLSHVAAQTVDIYTCAFVAGCIW-----FADKDALKGTLVKSLQDARPTRFMGVPRVY 324
            |.:||||||||:|||..|::|     |..|     |||.||||||||.:|::..||..||||||:
  Rat   317 EVVVSYLPLSHIAAQIYDLWT-----GIQWGAQVCFADPDALKGTLVNTLREVEPTSHMGVPRVW 376

  Fly   325 EKFQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDR 389
            ||..||:..||:.||.:::.:..||..:||:..:.........|..::|..|::::|:|||||.:
  Rat   377 EKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLARVRQALGFAK 441

  Fly   390 VLTLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFIN 454
            .......||||:.||:::||.|::::...:|:||:.|.|.:..|.:..|.:.|:.:|||..|.:|
  Rat   442 CQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPGCRVKLVN 506

  Fly   455 KDANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAG 519
            :||:|.||:|:.||.:||||::.::||.|::|.:.|||:||:|.:||.|::.:|||.||:|||||
  Rat   507 QDADGIGEICLWGRTIFMGYLNMEDKTHEAIDSEGWLHTGDMGRLDDDGFLYITGRLKELIITAG 571

  Fly   520 GENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSL 584
            |||:|||.||..:|.||..||:|.|:|:|||:|::|:|||..::.::.||.|.|:.::..:.:.:
  Rat   572 GENVPPVPIEEAVKMELPIISSAMLIGDQRKFLSMLLTLKCTLNPETSEPTDNLTEQAVEFCQRV 636

  Fly   585 GVEHKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVK 649
            |.:..|||:|:.... ..|:::|.:.|:|.|..:.:....:||:.||..||||..||||||:|:|
  Rat   637 GSKASTVSEIVGQKD-EAVYQAIHEGIQRVNANAAARPYHIQKWAILERDFSISGGELGPTMKLK 700

  Fly   650 RNVVSKMYADEIEKLY 665
            |..|.:.|.|.|:..|
  Rat   701 RLTVLEKYKDIIDSFY 716

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 267/641 (42%)
ACSBG_like 69..665 CDD:213299 258/602 (43%)