DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and LOC797658

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_009301929.2 Gene:LOC797658 / 797658 -ID:- Length:598 Species:Danio rerio


Alignment Length:637 Identity:129/637 - (20%)
Similarity:226/637 - (35%) Gaps:205/637 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 TPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAY-------DP-HASIHEQHKKTLVSA-- 332
            |..:::.:..|.:|              ..|.|.||::       .| :.|..:..||.|:.:  
Zfish    10 TVDELVDICVQSFD--------------DAGAVKDPSFVRMFLMMHPWYISSTDLSKKLLLKSQE 60

  Fly   333 -------------LHVWLDGFPEDWHEDNLQQILAFATKRLKRSDLHIKVLNRLERLIKQSLYGN 384
                         :..|:..||.::   :|...||...|.|:.:      ||             
Zfish    61 GSDDELRAKICHLVKFWISEFPAEF---DLNPALADQIKDLRDN------LN------------- 103

  Fly   385 GGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQA 449
               :||:|         ..||.:....:|: |.....:|.:...|             ......:
Zfish   104 ---TGGNE---------TPSQLIDVESVPS-YKWKRQVTKRVPSM-------------SKRRKMS 142

  Fly   450 FRFPHVPVRHFAEQLTRMDTELFKRL--------IPHQCLGHTWARRDSGGSETVVATINQFNAV 506
            ..|.|:.....||.||.::.:.|.::        :.|.|              ||...|.:....
Zfish   143 LLFDHLDPYELAEHLTYLEYKSFCKILFQDYHSFVMHGC--------------TVDNPILERFIT 193

  Fly   507 LFRVVSS----ILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKIWE 567
            ||..||.    :::.:....:||..|:.:|.:|::|..|:||::|.|::..|:::||.||     
Zfish   194 LFNSVSQWIQLMVLSKPTAPQRAAVIAHFIQVAEKLLQLQNFNTLMAVVGGLSNSSISRL----- 253

  Fly   568 VLPKERMEVFTELANICSEDNNAW-TLREVLKREGTAKNPDPGSDHSDRHLQKLILNLGTQTSHG 631
               ||..      |||.|:.|..: :|.::|...|..      |.:..|.         .:.:..
Zfish   254 ---KETQ------ANISSDTNKVFNSLLDMLTSSGNY------SQYRRRF---------AECTGF 294

  Fly   632 TIPYLGTFLTDLTMIHTANPDYLTENKL-INFDKKRKEFEVLAQIKLLQG-----AANT--YNLQ 688
            ..|.|...|.||..:|.|..|:....|. :|..|.::.:.:|.::.|:|.     .|||  .||.
Zfish   295 RFPILAVSLKDLIAVHVALSDWTDAQKTQVNLTKTQQLYAILQELSLVQSNPPHIEANTDLLNLL 359

  Fly   689 ADALFDHWFNSMPVFDEREAFELSCRLEP-----------PPPAPRKSVVSTNTSLTNTTASSTA 742
            ..:| |.:..      |.|.::||.:.||           ..|||:|..:..:.:.:....:..|
Zfish   360 TVSL-DQYHT------EEEIYQLSLQREPRATKPANSSSTSSPAPKKLSIIDDWAASVKPKADPA 417

  Fly   743 SIMGH--RKTDSIHSN-SSSGAG----SQFYCELNS-STSSRHNSLDRDVHHQHASLMSASSSVS 799
            .|..|  :..||:..| .::|.|    .:|.|..|: ...|:...||.:                
Zfish   418 IISKHIEKMVDSVFKNFDTNGDGFISREEFECIRNNFPYLSKFGELDTN---------------- 466

  Fly   800 NLSLDSSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPH--INAQLVQPS 849
                        |.||::..:.:...:|:........|..|  |....|:|:
Zfish   467 ------------QDGKISREEMIDYFMKASSLLNCKMGFIHTFIETTYVKPT 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 22/122 (18%)
RasGEF 454..719 CDD:214539 70/296 (24%)
RalGDS_RA 858..946 CDD:176351
LOC797658XP_009301929.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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