DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Rgl3

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_076111.2 Gene:Rgl3 / 71746 MGIID:1918996 Length:709 Species:Mus musculus


Alignment Length:809 Identity:241/809 - (29%)
Similarity:357/809 - (44%) Gaps:163/809 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 WGEEHEKNAIFTVYLKKVRYHRPTPTASNDSDDEI----SHLEWETVRVRFVKAATLARLVEALA 255
            ||||.|..|:::|.|::.|..|.||..|.:....|    :.|.:.|.:||.::||.|.|||..|.
Mouse    17 WGEETEDGAVYSVSLRRQRSQRSTPERSGEGQTPIPATDTFLHYRTSKVRALRAARLERLVHELV 81

  Fly   256 TDDGELESTFINVFLSTYRTFSTPKQVLSLL------------------TQRYDALHEKHLEELE 302
            :.|.|.:..|:..||:|:|.|....:||..|                  |:..|....|:|    
Mouse    82 SGDREQDPGFVPAFLATHRAFVPTARVLGFLLPPPPPPPPPPAGVDSKRTEGQDLNFSKNL---- 142

  Fly   303 QAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDW-----HED--NLQQILAFATKRL 360
                                    :.:||.|..||...|:|:     |::  |::..|.:|....
Mouse   143 ------------------------RAVVSVLGSWLRNHPQDFRDPPDHQNLGNVRIFLGWAAPGG 183

  Fly   361 KRSDLHIKVLNRLERLIKQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSY--DLT 423
            ..:       ...|:|::..| ....|....|....:|....|..|..        ||.:  |..
Mouse   184 AEA-------REAEKLLEDFL-KEAKGEQTEEEKRLAWSGPPRIAQTP--------GSEFAEDCV 232

  Fly   424 DQFNGMYLSPMGHGPIYRGPTHFLQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARR 488
            ::          .||...||.  |..|....|     |||||.||.|||.|:...:|||..|::|
Mouse   233 EE----------EGPSSEGPE--LLDFSVDDV-----AEQLTLMDVELFLRVRSCECLGSMWSQR 280

  Fly   489 D----SGGSETVVATINQFNAVLFRVVSSIL-IDRLKPQERALNISRWIDIAQELRMLKNFSSLK 548
            |    :|.|.||.||:.|||.|...|:.|:| ...|...:||..|.:||.|||..|.|:|||||:
Mouse   281 DRPGAAGISPTVRATVAQFNTVTGCVLGSVLAAPGLAASQRAQRIEKWIRIAQRCRELRNFSSLR 345

  Fly   549 AIISALNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHS 613
            ||:|||.||.||||.:.|..:.:|.:.||.:|:.|.|:::|..:.|.:|.:|.|.::.|..|.  
Mouse   346 AILSALQSNPIYRLKRSWGAVSREPLSVFRKLSQIFSDEDNHLSSRAILSQEETTEDDDCPSG-- 408

  Fly   614 DRHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLL 678
                     :|.::...|.:||||||||||.|:.||.||.|..| ||||:|:|||:|:||:|:.|
Mouse   409 ---------SLPSKLPPGPVPYLGTFLTDLVMLDTALPDTLKGN-LINFEKRRKEWEILARIQQL 463

  Fly   679 QGAANTYNLQADALFDHWFNSMPVFDEREAFELSCRLEPP----PPAPRKSVVSTNTSLTNTTAS 739
            |.....|:|...........:.....|.:::.:|..:|||    |.:||   :....|||...::
Mouse   464 QQRCQRYSLSPRPPILAALRAQRQLSEEQSYRVSRVIEPPAASCPSSPR---IRRRISLTKRLSA 525

  Fly   740 STASIMGHRKTDSIHSNSSSGAGSQFYCELNSSTSSRHNSLDRDVHHQHASLMSASSSVSNLSLD 804
            ..          |...|||.|....   :.:|.|||             .|..|..||..|....
Mouse   526 KL----------SREKNSSPGGSPG---DPSSPTSS-------------VSPGSPPSSPRNREPP 564

  Fly   805 SSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPSSGTP---HSAPDFYIIRVTY 866
            ...|.....|..:.|..:...:...|.....         |...||..|   ....:..:|||:.
Mouse   565 PPGSPPASPGPQSPSTKLSLTMDPPGPWPVT---------LTPSSSRVPLLGQQTSEARVIRVSI 620

  Fly   867 ETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLKLGLEDDPDR-FTLAQVLP-DKELVMPKNANV 929
            ..::..     ||:||:|...::.|.|::.|:.|..:.....| :.|.|||| |:||::|..|||
Mouse   621 NNNHGN-----LYRSILLTCQDKAPSVVQRALEKHNVPQPWARDYQLFQVLPGDRELLIPDGANV 680

  Fly   930 YYAVNTNYNLNFILRPRKEEGVAGSXSTA 958
            :||::.....:|:|  |::||...: |.:
Mouse   681 FYAMSPAAPGDFLL--RRKEGTGHTLSAS 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 33/156 (21%)
RasGEF 454..719 CDD:214539 112/273 (41%)
RA_RalGDS_like 858..946 CDD:340449 29/89 (33%)
Rgl3NP_076111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..55 8/28 (29%)
REM 73..199 CDD:100121 34/161 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..225 4/29 (14%)
RasGEF 244..503 CDD:214539 112/275 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..416 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..604 29/139 (21%)
Interaction with HRAS, MRAS and RIT1. /evidence=ECO:0000269|PubMed:10869344, ECO:0000269|PubMed:11313946 611..706 32/101 (32%)
RA_RGL3 611..697 CDD:340732 30/92 (33%)

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