DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and 4933421I07Rik

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001357701.1 Gene:4933421I07Rik / 71162 MGIID:1918412 Length:316 Species:Mus musculus


Alignment Length:96 Identity:22/96 - (22%)
Similarity:44/96 - (45%) Gaps:22/96 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 INVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLV 330
            :::|::.|||::|..:||.||.:.|.:.....:|:                      :|.|..:.
Mouse    89 LDIFVAMYRTYATTWEVLDLLMKTYASFRTDCIED----------------------QQTKSAIF 131

  Fly   331 SALHVWLDGFPEDWHEDNLQQILAFATKRLK 361
            |.|..|...||:|::|.....:|:..|:.::
Mouse   132 SFLFGWFQKFPQDFYESPDLAVLSQFTEYVR 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 22/96 (23%)
RasGEF 454..719 CDD:214539
RalGDS_RA 858..946 CDD:176351
4933421I07RikNP_001357701.1 REM 89..166 CDD:321967 22/96 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3629
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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