DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and rasgrp2

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_685135.5 Gene:rasgrp2 / 557063 ZFINID:ZDB-GENE-091118-124 Length:592 Species:Danio rerio


Alignment Length:613 Identity:129/613 - (21%)
Similarity:227/613 - (37%) Gaps:179/613 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 VRFVKAATLARLVEALA---TDDGEL-ESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLE 299
            |.:.:.|::..||||..   .::|.| :.:.:.:||:.:..:.:...:...|             
Zfish     4 VSWDQPASVEELVEACIKAFDNEGVLKDPSLVRMFLTMHPWYLSSSDLAKKL------------- 55

  Fly   300 ELEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQQILAFATKRLKRSD 364
             |:::||.        |..|:...|    :...:..|:..||.::   :|...||...:.||   
Zfish    56 -LQKSQQQ--------DCSANRQSQ----ICHLVKYWISEFPAEF---DLNPALAEQIRGLK--- 101

  Fly   365 LHIKVLNRLERLIKQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMIPTH-YGSSYDLTDQFNG 428
                     |||               |.||    ...||..:....||:: :....|.|.|   
Zfish   102 ---------ERL---------------EQNG----DVRRSLLIDIDSIPSYEWRRQLDETVQ--- 135

  Fly   429 MYLSPMGHGPIYRGPTHFLQAFRFPHVPVRHFAEQLTRMDTELFKRL--------IPHQCLGHTW 485
                       .:..|..|    |.|:.....||.||.|:.:.|.::        :.|.|     
Zfish   136 -----------KKRKTSLL----FDHLDASTLAEHLTYMEYKSFCKILFQDYHSFVMHGC----- 180

  Fly   486 ARRDSGGSETVVATINQFNAVLFRVVSS----ILIDRLKPQERALNISRWIDIAQELRMLKNFSS 546
                     ||...|.:....||..||.    :::.:...|:||..||.:|.:|:.|..|:||::
Zfish   181 ---------TVDNPILERFITLFNSVSQWIQIMVLSKPTAQQRATVISEFIKVAERLLQLQNFNT 236

  Fly   547 LKAIISALNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSD 611
            |.|::..|:::||.||.....::..:..:||..|..:.:...|                      
Zfish   237 LMAVVGGLSNSSIARLKNTQALISSDTRKVFDGLVELVTSFGN---------------------- 279

  Fly   612 HSDRHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKL-INFDKKRKEFEVLAQI 675
             ..|:.|:.     ::.|....|.||..|.||..:|.|.||::...|. :|..|..:.:.:|.::
Zfish   280 -YSRYRQRF-----SECSGFRFPILGVHLKDLIAVHVALPDWIDPEKTRVNLTKTYQLYAILEEL 338

  Fly   676 KLLQGAANTYNLQADAL------FDHWFNSMPVFDEREAFELSCRLEPPPPAPRKSVVSTNTS-- 732
            .|:|..........|.|      .|.:.:      |.:.::||.:.|     ||...:||::|  
Zfish   339 ALIQSTPPNIEANTDLLNLLIVSLDQYHS------EDDIYQLSLQRE-----PRSIKLSTSSSKS 392

  Fly   733 ---LTNTTASST-----ASIMG---HRKTDSIHSN-SSSGAG--SQFYCEL---NSSTSSRHNSL 780
               |....|||.     .||:.   .:..:|:..| .:.|.|  ||...|:   |.....:.:.|
Zfish   393 QSPLIEQWASSVKPKADPSIINKHIEKMVESVFQNYDTDGDGYISQEEFEIIRSNFPYLGKFDEL 457

  Fly   781 DRD-----VHHQHASLMSASSSVSNLSL 803
            |::     ...:.....:.:||:.|..:
Zfish   458 DQNQDCKISREEMIEYFTKASSLQNCKM 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 26/135 (19%)
RasGEF 454..719 CDD:214539 64/283 (23%)
RA_RalGDS_like 858..946 CDD:340449
rasgrp2XP_685135.5 None
Blue background indicates that the domain is not in the aligned region.

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