DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and RAPGEF6

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001157858.1 Gene:RAPGEF6 / 51735 HGNCID:20655 Length:1609 Species:Homo sapiens


Alignment Length:1014 Identity:189/1014 - (18%)
Similarity:307/1014 - (30%) Gaps:426/1014 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 KVRYHRPTPTASNDSDDEI----SHLEWE---TVRVRFVKAATLARLVEALATDDGELESTFINV 268
            ::..|....|...:.:.||    .|.|.:   |.:...|..||..||:..|..:...::.|:|..
Human   378 RILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEEHSIVDPTYIED 442

  Fly   269 FLSTYRTF-STPKQV-LSLLTQ-RYDALHEK------------------------HLEE----LE 302
            ||.||||| .:|..| :.||.. :.|:|.:|                        .|||    ||
Human   443 FLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLLWVNNHFNDFEGDPAMTRFLEEFEKNLE 507

  Fly   303 QAQQNG--QVMDPAYDPHASIHE--QHKKTLVSALHVWLDGFPE--------------------- 342
            ..:.||  ::::.|....|...:  ..|.:..|.|...|:|..|                     
Human   508 DTKMNGHLRLLNIACAAKAKWRQVVLQKASRESPLQFSLNGGSEKGFGIFVEGVEPGSKAADSGL 572

  Fly   343 -------DWHEDNLQQI----------------------------LAFATKRLKRSDLHIKVL-- 370
                   :.:..|.:.|                            |.|.|::.|....||..:  
Human   573 KRGDQIMEVNGQNFENITFMKAVEILRNNTHLALTVKTNIFVFKELLFRTEQEKSGVPHIPKIAE 637

  Fly   371 ------------------------------------NRLERLIKQS--------LYGNGGGSG-- 389
                                                |::.:::.::        |:.:||.|.  
Human   638 KKSNRHSIQHVPGDIEQTSQEKGSKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQ 702

  Fly   390 -----GSENNGHS--------WLSAARSQQMQQFMIPTHYGSSYDLTDQ---------------- 425
                 |:.:..||        .||::....:|.......:.:..|:.||                
Human   703 DDSIVGTRHCRHSLAIMPIPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKVDQQSCYIII 767

  Fly   426 ----------FNGMY-----------------LSPMGHGPIYRGPTHF----------------- 446
                      |:.::                 ::|.|.....|.|..|                 
Human   768 SKDTTAKEVVFHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKN 832

  Fly   447 ---------------------LQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDS 490
                                 |...:...:.|   |.||:..|.:||:.:.|.:.:...:.....
Human   833 NMETETLCSDEDAQELVKESQLSMLQLSTIEV---ATQLSMRDFDLFRNIEPTEYIDDLFKLNSK 894

  Fly   491 GGSETVVATINQFNAVLFRVVSSILID--RLKPQERALNISRWIDIAQELRMLKNFSSLKAIISA 553
            .|:..:....:..|...|.|.|.||.:  :||   |...|..:|.||...|..|||:|:.||||.
Human   895 TGNTHLKRFEDIVNQETFWVASEILTEANQLK---RMKIIKHFIKIALHCRECKNFNSMFAIISG 956

  Fly   554 LNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQ 618
            ||..|:.||...||.||.:..:...:|.:|.....|....|.:|               |.:.:|
Human   957 LNLASVARLRGTWEKLPSKYEKHLQDLQDIFDPSRNMAKYRNIL---------------SSQSMQ 1006

  Fly   619 KLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQI-------- 675
            ..|           ||.......|:|.:|..|...:  :.|:||:|.|...:.:.|:        
Human  1007 PPI-----------IPLFPVVKKDMTFLHEGNDSKV--DGLVNFEKLRMISKEIRQVVRMTSANM 1058

  Fly   676 -----------------KLLQGAANTYN-----------------LQADALFD---------HWF 697
                             .|.||:.|:..                 |.|..|::         .:.
Human  1059 DPAMMFRQRKKRWRSLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYL 1123

  Fly   698 NSMPVFDEREAFE-LSCRLEPP-------------------PPAPRKSVVST------------- 729
            :|:.|..:.|.|: :|.:.||.                   .|.|.:|...|             
Human  1124 SSLDVETDEEKFQMMSLQWEPAYGTLTKNLSEKRSAKSSEMSPVPMRSAGQTTKAHLHQPHRVSQ 1188

  Fly   730 -----------------------NTSLTNTTASSTASIMGHRKTD-------SIHSN---SSSGA 761
                                   ||||......:|..|.|.:.|:       |:||:   |..|:
Human  1189 VLQVPAVNLHPIRKKGQTKDPALNTSLPQKVLGTTEEISGKKHTEDTISVASSLHSSPPASPQGS 1253

  Fly   762 GSQFYCELNSSTSSRHNSLDRDVHHQHASLMSASSSVSNLSLDSSNSG-------------GRQS 813
            ..:.|..:.|:.|      |......|:.:.|.||.|||.|:||.::.             ...:
Human  1254 PHKGYTLIPSAKS------DNLSDSSHSEISSRSSIVSNCSVDSMSAALQDERCSSQALAVPEST 1312

  Fly   814 G---KLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPS 849
            |   |..|:..:|:. ..||.|.|          |::||
Human  1313 GALEKTEHASGIGDH-SQHGPGWT----------LLKPS 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 44/260 (17%)
RasGEF 454..719 CDD:214539 74/337 (22%)
RalGDS_RA 858..946 CDD:176351
RAPGEF6NP_001157858.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
CAP_ED 37..>82 CDD:294041
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..250
Crp 274..>448 CDD:223736 18/69 (26%)
CAP_ED 280..380 CDD:237999 0/1 (0%)
RasGEFN 412..525 CDD:214571 30/112 (27%)
PDZ_signaling 529..609 CDD:238492 8/79 (10%)
UBQ 749..833 CDD:294102 8/83 (10%)
RasGEF 857..1081 CDD:238087 62/257 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1200..1282 19/87 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1310..1332 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1463..1486
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1579..1609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3629
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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