DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Rasgrp2

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001076446.2 Gene:Rasgrp2 / 361714 RGDID:1311630 Length:608 Species:Rattus norvegicus


Alignment Length:608 Identity:127/608 - (20%)
Similarity:213/608 - (35%) Gaps:190/608 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 LEEL-----EQAQQNGQVMDPA-----------YDPHASI-------HEQHKKTLVSALHV---- 335
            :|||     |....:|:|.||.           |.|.:.:       ::|.:|...::|.|    
  Rat    13 VEELLRGCIEAFDDSGKVRDPQLVRMFLMMHPWYIPSSQLASKLLHFYQQSRKDNSNSLQVKTCH 77

  Fly   336 ----WLDGFPEDWHEDNLQQILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGGGSGGSENNGH 396
                |:..||.::   :|...||...|.||             .|:.|           ..|..|
  Rat    78 LVRYWVSAFPAEF---DLNPELAEQIKELK-------------ALLDQ-----------EGNRRH 115

  Fly   397 SWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQAFRFPHVPVRHFA 461
            |.|....|       :|| |.....:|.:           .|:.:....  .:..|.|:.....|
  Rat   116 SSLIDIES-------VPT-YKWKRQVTQR-----------NPVEQKKRK--MSLLFDHLEPMELA 159

  Fly   462 EQLTRMDTELFKRL--------IPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDR 518
            |.||.::...|.::        :.|.|         :..:..:...|:.||:| .:.|..:::.:
  Rat   160 EHLTYLEYRSFCKILFQDYHSFVTHGC---------TVDNPVLERFISLFNSV-SQWVQLMILSK 214

  Fly   519 LKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLS-----------KIWEVLPKE 572
            ....:|||.|:.::.:|::|..|:||::|.|::..|:.:||.||.           |:||.|   
  Rat   215 PTATQRALVITHFVHVAEKLLQLQNFNTLMAVVGGLSHSSISRLKETHSHVSPDTIKLWEGL--- 276

  Fly   573 RMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQKLILNLGTQTSHGTIPYLG 637
                 |||.......:|                          :.::|...:|.:     .|.||
  Rat   277 -----TELVTATGNYSN--------------------------YRRRLAACVGFR-----FPILG 305

  Fly   638 TFLTDLTMIHTANPDYLTENKL-INFDKKRKEFEVLAQIKLLQGAANTYNLQADAL------FDH 695
            ..|.||..:..|.||:|...:. :|..|.|:.|.:|.::.::...........|.|      .|.
  Rat   306 VHLKDLVALQLALPDWLDPGRTRLNGAKMRQLFSILEELAMVTSLRPPVQANPDLLSLLTVSLDQ 370

  Fly   696 WFNSMPVFDEREAFELSCRLEP-------------PPPAPRKSVVSTNTSLTNTTASSTASIMGH 747
            :..      |.|.::||.:.||             |||.|  .|:...||:....... |.:..|
  Rat   371 YQT------EDELYQLSLQREPRSKSSPTSPTSCTPPPRP--PVLEEWTSVAKPKLDQ-ALVAEH 426

  Fly   748 --RKTDSIHSN---SSSGAGSQFYCEL---NSSTSSRHNSLDRDVHHQHASLMSASSSVSNLSLD 804
              :..:|:..|   ...|..||...::   |....|....||::    ....:|....:|.....
  Rat   427 IEKMVESVFRNFDVDGDGHISQEEFQIIRGNFPYLSAFGDLDQN----QDGCISREEMISYFLRS 487

  Fly   805 SSNSGGRQSGKLTHSQSMGNGLK 827
            ||..|||..  ..|:....|.|:
  Rat   488 SSVLGGRMG--FVHNFQESNSLR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 24/110 (22%)
RasGEF 454..719 CDD:214539 63/303 (21%)
RA_RalGDS_like 858..946 CDD:340449
Rasgrp2NP_001076446.2 RasGEFN 7..121 CDD:214571 29/134 (22%)
RasGEF 150..387 CDD:214539 63/291 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..405 6/24 (25%)
FRQ1 <407..484 CDD:444056 15/81 (19%)
C1_RASGRP2 496..551 CDD:410411 3/15 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 555..596
Blue background indicates that the domain is not in the aligned region.

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