DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and 4930596D02Rikl2

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_341542.5 Gene:4930596D02Rikl2 / 361257 RGDID:1564129 Length:254 Species:Rattus norvegicus


Alignment Length:164 Identity:43/164 - (26%)
Similarity:67/164 - (40%) Gaps:31/164 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SNDSDDEISH-----LEWETVRVRFVKAATLARLVEALATDDGELESTFINVFLSTYRTFSTPKQ 281
            :.|..||..|     :..|..|...:.|..:..:|..|.......:..|...||..||.|:|.:.
  Rat    53 TQDYADEGEHECAPKVVTEPCRESPISADMVENMVNQLVPSLQGGDPLFAPSFLYAYRQFTTTQH 117

  Fly   282 VLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHE 346
            ||.||.:|: |......||                     .||.|..|.|.|..|:|.:||::.:
  Rat   118 VLDLLLKRF-AYFRLDCEE---------------------DEQIKSVLCSFLDSWIDIYPEEFCQ 160

  Fly   347 DN----LQQILAFATKRLKRSDLHIKVLNRLERL 376
            ..    |:::.|:.|..:..|:|:::|...||.|
  Rat   161 TGNLSILKKLKAYLTVNMPSSNLNLRVHMLLEEL 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 36/135 (27%)
RasGEF 454..719 CDD:214539
RA_RalGDS_like 858..946 CDD:340449
4930596D02Rikl2XP_341542.5 REM 86..197 CDD:100121 36/131 (27%)
Blue background indicates that the domain is not in the aligned region.

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