DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Epac

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001097202.2 Gene:Epac / 35588 FlyBaseID:FBgn0085421 Length:1006 Species:Drosophila melanogaster


Alignment Length:695 Identity:127/695 - (18%)
Similarity:226/695 - (32%) Gaps:236/695 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 DDLDVSSAVLNAERKVVASLK-YLCACTGATLRNLSKKTKDLHAKNYTYTKPTWRLWGEEHEKNA 203
            ||....:.:.:|.|.....|| ..|........:.::..:|:.|.       |.||  :||.|:.
  Fly   415 DDFGKLALINDAPRAATIVLKENNCHLLRVDKEHFNRILRDVEAN-------TLRL--QEHGKDV 470

  Fly   204 IFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARLVE-----ALATDDGELES 263
            :   .|::|...|...:|...:                |.:.|.|:::|     .|....|.:: 
  Fly   471 L---VLERVAKQRGQHSAFKYT----------------VMSGTPAKMLEHLLETRLGQSVGGMD- 515

  Fly   264 TFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQ----------------------- 305
            .|::.||.|:..|....|::..|...:      |.:..|.||                       
  Fly   516 PFLDDFLLTHIVFMPVVQLVDELANYF------HCDAHEDAQTPEDREYIINFKKRVIQFMQKWV 574

  Fly   306 --------QNGQVMDPAYDPHASIHE----QHKKTLVSALHVWLDGFPEDWHED---------NL 349
                    :...|.|...|..|.:..    ..:.::|..:...:..:.||.:::         |.
  Fly   575 MAVRHAAFEEPSVCDFIEDLAAEVEADPDLNEETSIVHNVLTQMARYQEDRNQNAGQKWKLPPNG 639

  Fly   350 QQILAFA-----TKRLKRSD--------------------LH-----IKV-------LNR-LERL 376
            |.|..|:     :|.:.|.|                    :|     ||.       ||| .|.|
  Fly   640 QPICLFSGNATPSKTVIRPDDDIIFRVYCADHTYCTLRFPMHTTAELIKACAADKLQLNRGPEDL 704

  Fly   377 IKQSLYGNGGGSGGSEN----------NGHSWLSAA----RSQQMQQFMIPTHYGSSYDLTDQFN 427
            :...:..||..|...:|          ||..::|..    ...|:|:...||. |...||.    
  Fly   705 VLVEVKSNGERSVFKDNDVSIPTGLSLNGRLFVSVKDHLDALTQLQEQECPTE-GVDIDLE---- 764

  Fly   428 GMYLSPMGHGPIYRGPTHFLQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGG 492
              .||                        .:..|..:|..:.:||..:..::.|.||:.|...| 
  Fly   765 --ILS------------------------TKELAYHITLFEWDLFWAVHEYELLYHTFGRHHFG- 802

  Fly   493 SETVVATIN----QFNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISA 553
              .:.|.::    :||.|.:.:|:. |:......:|...:.::|.:|...:..:|.::..|::..
  Fly   803 --KITANLDVFLRRFNEVQYWIVTE-LVSTPSLSKRVGLVRKFIKLAAYCKEYQNLNAFFAVVMG 864

  Fly   554 LNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQ 618
            |::.::.||.:.||.:|.:..::|.|...:.....|....|..:   |..:.|            
  Fly   865 LSNMAVSRLQQTWEKIPSKFRKIFQEFEALIDPSRNHRAYRVFV---GKLQPP------------ 914

  Fly   619 KLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAAN 683
                         .||::...|.|:|..|..|...|  :.|:||:|.....:.:..|:..:..  
  Fly   915 -------------LIPFMPLLLKDMTFAHEGNKTSL--DGLVNFEKMHMMAQTMRTIRFCRSR-- 962

  Fly   684 TYNLQADALFDHWFNSMPVFDEREAFELSCRLEPPPPAPRKSVVS 728
                                        |..||||.|.....|.|
  Fly   963 ----------------------------SLGLEPPSPKSEGEVRS 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 38/218 (17%)
RasGEF 454..719 CDD:214539 49/268 (18%)
RalGDS_RA 858..946 CDD:176351
EpacNP_001097202.2 Crp 28..>146 CDD:223736
CAP_ED 36..146 CDD:237999
DEP_Epac 199..330 CDD:239884
CAP_ED 352..463 CDD:237999 10/54 (19%)
Crp 373..525 CDD:223736 28/138 (20%)
RasGEF_N 489..594 CDD:279012 19/127 (15%)
UBQ 665..>714 CDD:294102 9/48 (19%)
RasGEF 766..1002 CDD:214539 55/302 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467917
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3629
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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