DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Ralgdsl2

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_997712.1 Gene:Ralgdsl2 / 294283 RGDID:1302985 Length:778 Species:Rattus norvegicus


Alignment Length:829 Identity:241/829 - (29%)
Similarity:349/829 - (42%) Gaps:199/829 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 LWGEEHEKNAIFTVYLKKVRYHRPT----PTASNDSDDEISHLEWETVRVRFVKAATLARLVEAL 254
            :|.|| |..|.|||..::.|...|:    |..|:                |.::|.||..||..|
  Rat    57 IWDEE-EDGATFTVTSRQYRPLDPSAPLPPPRSS----------------RRLRAGTLEALVRHL 104

  Fly   255 --ATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDP 317
              |...| .:.||....|:|:|.|::...:..|:..|.:||......|||:.             
  Rat   105 LDARTSG-ADMTFTPALLATHRAFTSTPALFGLVADRLEALESHPPGELERT------------- 155

  Fly   318 HASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQQILAFATKRLKRSDLHIKVLNRLERLIKQSLY 382
                    ....:|.|..||...|||:..:...|                  |:|||..:.::.|
  Rat   156 --------TGVAISVLSTWLASHPEDFGSEVKGQ------------------LDRLESFLLRTGY 194

  Fly   383 ----GNGGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGP 443
                |..|||.....|..:.:........:...:|.  .|..|.||..  ::|:.          
  Rat   195 AAREGVVGGSADLIRNLRARVDPRAPDLPKPLALPD--DSPADPTDVL--VFLAD---------- 245

  Fly   444 THFLQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSE----TVVATINQFN 504
                           |.|||||.:|.|||..|||.||||..|..||..|..    :|.||:.|||
  Rat   246 ---------------HLAEQLTLLDAELFLSLIPSQCLGGLWGHRDRPGHSHLCPSVRATVTQFN 295

  Fly   505 AVLFRVVSSIL-------------IDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNS 556
            .|...||||:|             :..|:|.:||..:.:||.:|:|.|:|:||||:.|::|||.|
  Rat   296 KVAGAVVSSVLGATPTGEGPREVTVRPLRPPQRARLLEKWIRVAEECRLLRNFSSVYAVVSALQS 360

  Fly   557 NSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNP-DPGSDHSDRHLQKL 620
            :.|:||...|....::.:.:|:.|..|.||::|....||:|.:|...:.| :|.|..:.|.    
  Rat   361 SPIHRLRAAWGETTRDSLRIFSSLCQIFSEEDNYSQSRELLMQEVKLQPPVEPHSKKAPRS---- 421

  Fly   621 ILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTY 685
                |:: ..|.:|||||||.||.|:..|:.|.| ||..|||||:||||.||:::..||.....|
  Rat   422 ----GSR-GGGVVPYLGTFLKDLVMLDAASKDEL-ENGYINFDKRRKEFAVLSELLRLQNECRGY 480

  Fly   686 NLQADALFDHWFNSMPVFDEREAFELSCRLEP----PPPAP---RKSVVSTN-----------TS 732
            :|:.:.....|...:....|.::..:||.:||    ..||.   |.::|.|.           |.
  Rat   481 DLRPNPDIQQWLQGLQPLTEAQSHRVSCEVEPSGTIDSPAARTLRPALVITQWTEVLGSVGGPTP 545

  Fly   733 LTN-------------TTASSTASIMGHRKTDSIHSNSSSGAGSQFYCELNSSTSSRHNSLDRDV 784
            |.:             |.|.....:..|.|..|:.|..|:         |.|| .|.|:..|.. 
  Rat   546 LVSWDRPTVGGDEVPGTPAPLLTRLAQHMKWPSVSSLDSA---------LESS-PSLHSPADPG- 599

  Fly   785 HHQHASLMSASSSVSNLSLDSSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPS 849
               |.|..::|...|.....|::.|...||......|...|.   |.|.:..||           
  Rat   600 ---HLSPPASSPRPSRGHRRSASCGSPLSGGTGEGASRSAGC---GGGVSGPGS----------- 647

  Fly   850 SGTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLKLGLEDD--PDRFTL 912
                   .|..||||..|...   ||.| ||||::.:.::.|.|| :.:||....|.  ...|.|
  Rat   648 -------SDCRIIRVQMELGE---DGSV-YKSILVTSQDKAPSVI-SRVLKKNNRDSAVASEFEL 700

  Fly   913 AQVLP-DKELVMPKNANVYYAVNTNYNLNFILRPRKEEGVAGSXSTAVP 960
            .|:|| |:||.:|.:|||:||:: ..:.:|:||.|:....|.|.|.:.|
  Rat   701 VQLLPGDRELTIPHSANVFYAMD-GASHDFLLRQRRRPSAATSGSHSGP 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 32/133 (24%)
RasGEF 454..719 CDD:214539 108/286 (38%)
RA_RalGDS_like 858..946 CDD:340449 36/90 (40%)
Ralgdsl2NP_997712.1 RasGEFN 90..212 CDD:214571 40/161 (25%)
RasGEF 239..509 CDD:238087 106/306 (35%)
RA_RGL2 649..734 CDD:340731 36/90 (40%)

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