DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and RASGEF1C

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_778232.2 Gene:RASGEF1C / 255426 HGNCID:27400 Length:466 Species:Homo sapiens


Alignment Length:515 Identity:120/515 - (23%)
Similarity:195/515 - (37%) Gaps:148/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 AATLARLVEALA-TDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQN 307
            :|:|..|::.|. |.|...|..:|..||.:.|.|..|:::|:.:.         || .:||.|.:
Human    40 SASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVC---------HL-CIEQQQLD 94

  Fly   308 GQVMDPA----YDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQQILAFATKRLKRSDLHIK 368
            ..|:|.|    :.|          .|:..|..|.:.||.|:.|::....|.....|:...|...:
Human    95 KPVLDKARVRKFGP----------KLLQLLAEWTETFPRDFQEESTIGHLKDVVGRIAPCDEAYR 149

  Fly   369 VLNRLERLIKQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMI----PTHY------------- 416
              .|:.:|: |:|              |..|:|.|  |..:.::    |..|             
Human   150 --KRMHQLL-QAL--------------HQKLAALR--QGPEGLVGADKPISYRTKPPASIHRELL 195

  Fly   417 ---GSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQAF--RFPHVPVRH-FAEQLTRMDTELFKRL 475
               ...|.|..|...:.|..:.|    .||..|:|||  :.|....:. |:::.:.::       
Human   196 GVCSDPYTLAQQLTHVELERLRH----IGPEEFVQAFVNKDPLASTKPCFSDKTSNLE------- 249

  Fly   476 IPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRM 540
                                  |.:..||.:.:.|.:.|.:. .|.::||..|..:||:|:|...
Human   250 ----------------------AYVKWFNRLCYLVATEICMP-AKKKQRAQVIEFFIDVARECFN 291

  Fly   541 LKNFSSLKAIISALNSNSIYRLSKIWEVLPKERMEVFTEL-------ANICSEDNNAWTLREVLK 598
            :.||:||.||||.:|.:.:.||.|.|   .|.|...|..|       .|.|   |....||....
Human   292 IGNFNSLMAIISGMNMSPVSRLKKTW---AKVRTAKFFILEHQMDPTGNFC---NYRTALRGAAH 350

  Fly   599 REGTAKNPDPGSDHSDRHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFD 663
            |..||        ||.|  :|::           ||:....:.|:..::....:.| .|..:||:
Human   351 RSLTA--------HSSR--EKIV-----------IPFFSLLIKDIYFLNEGCANRL-PNGHVNFE 393

  Fly   664 KKRKEFEVLAQIKLLQGAANTYN-----LQADALFDHWFNSMPVFDEREAFELSCRLEPP 718
               |..|:..|:    |...|:.     .:.||...|:..:.|:|.|...:..|...|.|
Human   394 ---KFLELAKQV----GEFITWKQVECPFEQDASITHYLYTAPIFSEDGLYLASYESESP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 34/136 (25%)
RasGEF 454..719 CDD:214539 64/278 (23%)
RA_RalGDS_like 858..946 CDD:340449
RASGEF1CNP_778232.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
REM 42..160 CDD:100121 36/154 (23%)
RasGEF 204..395 CDD:459872 61/255 (24%)
Blue background indicates that the domain is not in the aligned region.

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