DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and 4930596D02Rik

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001028938.1 Gene:4930596D02Rik / 239036 MGIID:3588288 Length:216 Species:Mus musculus


Alignment Length:142 Identity:44/142 - (30%)
Similarity:67/142 - (47%) Gaps:26/142 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 VKAATLARLVEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQ 306
            |.|.||.:||..|.......:..||..||||||.|:|..|||:||.:||:               
Mouse    69 VSADTLKKLVNHLVPSLQSGDPFFIPAFLSTYRRFATTLQVLNLLFKRYE--------------- 118

  Fly   307 NGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDN----LQQILAFATKRLKRSDLHI 367
                   .:.|::...||.|.||.|.|:.|:|...||:.:.:    |..:..:.:..:..|||::
Mouse   119 -------YFRPNSEEDEQVKNTLCSFLNTWMDKNTEDFCQTSDLLPLNYLKTYLSMNMPDSDLNV 176

  Fly   368 KVLNRLERLIKQ 379
            :|...|.:|.|:
Mouse   177 RVTRLLTQLQKE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 41/135 (30%)
RasGEF 454..719 CDD:214539
RA_RalGDS_like 858..946 CDD:340449
4930596D02RikNP_001028938.1 REM 73..188 CDD:100121 41/136 (30%)
Blue background indicates that the domain is not in the aligned region.

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