DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Gm4871

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001094933.1 Gene:Gm4871 / 231885 MGIID:3648713 Length:314 Species:Mus musculus


Alignment Length:197 Identity:38/197 - (19%)
Similarity:69/197 - (35%) Gaps:55/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 KPTWRLWGEEHE--KNAIFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARLV 251
            :|....|...|.  |...|...|.|..|               :..|:....:.::.||....  
Mouse    30 RPLTHFWHASHRNPKEPDFPYNLPKFTY---------------NSFEFVEQMIAYIPAAVHYH-- 77

  Fly   252 EALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYD 316
                      :...|::||:.|..:.:..:||.||.:.|                      |::.
Mouse    78 ----------DQLSISLFLAVYHRYCSTWEVLDLLMKTY----------------------PSFQ 110

  Fly   317 PHASIHEQHKKTLVSALHVWLDGFPEDWHED-NL---QQILAFATKRLKRSDLHIKVLNRLERLI 377
            |.....:..|..:.:.|..|||.|||.:.:. ||   :|::.:|.:.:..::...:....|.||.
Mouse   111 PDCEQDQLTKSAIFNFLAHWLDTFPEHFFDSPNLAVMRQLMDYAGRHMPSAEFDKESRELLSRLE 175

  Fly   378 KQ 379
            :|
Mouse   176 EQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 26/135 (19%)
RasGEF 454..719 CDD:214539
RA_RalGDS_like 858..946 CDD:340449
Gm4871NP_001094933.1 REM 63..176 CDD:100121 28/146 (19%)
Blue background indicates that the domain is not in the aligned region.

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