DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and 4930474N05Rik

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_778173.1 Gene:4930474N05Rik / 218921 MGIID:3586330 Length:218 Species:Mus musculus


Alignment Length:223 Identity:56/223 - (25%)
Similarity:90/223 - (40%) Gaps:67/223 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 LSKKTKDLHAKNYTYTKPTW---------RLWGEEHEKNAIFTVYLKKVRYHRPTPTASNDSDDE 228
            |.|:.::.|..       .|         |||                 .:.|...|.:....|:
Mouse    14 LKKENREGHGS-------VWRHRVHSCLQRLW-----------------PFSRKGKTVTKGKQDQ 54

  Fly   229 ISHLEW---ETVRVRFVKAATLARLVEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRY 290
             :|.:.   |..|...:.|..:.:||..|.....|.:..|:::||||||:|.||.|||.||..||
Mouse    55 -NHTDQDLREPRRESPISAEMVVKLVNNLVPSLQEGDHFFVSIFLSTYRSFVTPLQVLGLLFMRY 118

  Fly   291 DALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDN----LQQ 351
                                  |.:.||:..|.|.:.:|.:.||.|:|..|||:.:.:    |..
Mouse   119 ----------------------PYFHPHSVEHRQVRSSLCNFLHTWMDKNPEDFCDPSDMLPLTY 161

  Fly   352 ILAFATKRLKRSDLHIKVLNRLERLIKQ 379
            :.|:.:..:..|:|.|    |::||:.:
Mouse   162 LKAYLSVHMPHSELFI----RVDRLLNE 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 42/135 (31%)
RasGEF 454..719 CDD:214539
RA_RalGDS_like 858..946 CDD:340449
4930474N05RikNP_778173.1 REM 77..189 CDD:100121 42/135 (31%)
Blue background indicates that the domain is not in the aligned region.

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