DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Rapgef5

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001360918.1 Gene:Rapgef5 / 217944 MGIID:2444365 Length:879 Species:Mus musculus


Alignment Length:608 Identity:122/608 - (20%)
Similarity:218/608 - (35%) Gaps:176/608 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 LKKVRYHRPTPTASNDSDDEISHLEWETVRVRF-VKAATLARLVEALATD-------DGELESTF 265
            ||||....|.||:.:..:|           .|: |.:.|..:::|.|..|       ..|.| |.
Mouse   347 LKKVASCGPAPTSGSAEND-----------ARYVVVSGTPEKILEHLLNDLHLAEVQHKETE-TL 399

  Fly   266 INVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLV 330
            ::.||.||..|.|...:...|.:.|.|      ::.:..::|..|  |.          .|:.::
Mouse   400 LDDFLLTYTVFMTTDDLCQALLRHYSA------KKYQGEEENSDV--PC----------RKRKVL 446

  Fly   331 SALHVWLDGFPEDW-HEDNLQQILAFATKRLKRSDLH-----IKVLNRLERL------------- 376
            ..:..|:..: :|| |||...::......|....|::     .|.|...:::             
Mouse   447 HLVSQWISLY-KDWLHEDEHSKMFLKTIYRNVLDDVYEYPILEKELKEFQKILGVYRRHTVDEYS 510

  Fly   377 -------------IKQSLYGNGGGSGGSEN-------NGHSWLSA-------------------A 402
                         :|::...:.|....:|.       ..||::|.                   .
Mouse   511 PQKKNKALFHQFSLKENWLQHRGTVAETEEIFCHVYITEHSYISVKAKVSSTAQEILKVVAEKLQ 575

  Fly   403 RSQQMQQFMIPTHYGSSY------------------------DLTDQFNGMYLSPMGHGPIYRGP 443
            |:::....:..|..|..:                        ||.|..|          |:....
Mouse   576 RAEEDLALVAITFSGEKHEFQPNDLAISKSLEASGRIYVYRKDLADTLN----------PLAENE 630

  Fly   444 THFLQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSETVVATINQ-FNAVL 507
            ....::.|...:.....|.:|...|..||..:...:.:..|::|:.:|.:...::.:.| .|.|.
Mouse   631 ESQQRSMRILGMNTWDLALELMSFDWSLFNSIHEQELIYFTFSRQGNGENTVNLSLLLQRCNEVQ 695

  Fly   508 FRVVSSILI-DRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKIWEVLPK 571
            ..|.:.||: .:|  .:|...:.::|.||...:..:|.:|..||:..||:.|:.|||:.||.:|.
Mouse   696 LWVATEILLCSQL--GKRVQLVKKFIKIAAHCKAQQNLNSFFAIVMGLNTASVSRLSQTWEKIPG 758

  Fly   572 ERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQKLILNLGTQTSHGTIPYL 636
            :..::|:||.::.....|....|:..|:....|                            ||::
Mouse   759 KFKKLFSELESLTDPSLNHKAYRDAFKKMKPPK----------------------------IPFM 795

  Fly   637 GTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADAL------FDH 695
            ...|.|:|.||..|..:|  :.|:||:|    ..::|..........|....:|..      ...
Mouse   796 PLLLKDVTFIHEGNKTFL--DNLVNFEK----LHMIADTVRTLRHCRTNQFGSDVSPKEQQELKS 854

  Fly   696 WFNSMPVFDEREA-FELSCRLEP 717
            :.|.:.|.|.::| ||||.||||
Mouse   855 YVNHLYVIDSQQALFELSHRLEP 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 30/170 (18%)
RasGEF 454..719 CDD:214539 67/273 (25%)
RA_RalGDS_like 858..946 CDD:340449
Rapgef5NP_001360918.1 DEP_Epac 98..221 CDD:239884
RasGEFN 367..498 CDD:214571 32/150 (21%)
RasGEF 639..878 CDD:214539 67/275 (24%)
Blue background indicates that the domain is not in the aligned region.

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