DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Rgl1

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001333046.1 Gene:Rgl1 / 19731 MGIID:107484 Length:803 Species:Mus musculus


Alignment Length:822 Identity:295/822 - (35%)
Similarity:425/822 - (51%) Gaps:141/822 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 WGEEHEKNAIFTVYLKKVRYHRPTPTASND-------SDDEI--SHL--EWETVRVRFVKAATLA 248
            ||||.|:.|::.|.||:|:..:    |:|.       ..|::  .|.  ::||.::|.:||.||.
Mouse    50 WGEEVEEGAVYHVTLKRVQIQQ----AANKGARWLGVEGDQLPPGHTVSQYETCKIRTIKAGTLE 110

  Fly   249 RLVEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDP 313
            :|||.|.|..|:.:.|:|::||||||.|::.|:||.||..||..|...:.|:      :|....|
Mouse   111 KLVENLLTAFGDNDFTYISIFLSTYRGFASTKEVLELLLDRYGNLTGPNCED------DGSQSSP 169

  Fly   314 AYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDN----LQQILAFATKRLKRSDLHIKVLNRLE 374
              :..|.|    :..:.|.|..|||...||:.|..    ||::|.:..:.:..||...:..|.||
Mouse   170 --ESKAVI----RNAIASILRAWLDQCAEDFREPPHFPCLQKLLEYLKQMMPGSDPERRAQNLLE 228

  Fly   375 RLIKQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPI 439
            :..||.:..:.|....|.      .|....::::.       |.|.:.|:....:          
Mouse   229 QFQKQDVDSDNGLLNTSS------FSLEEEEELES-------GGSAEFTNFSEDL---------- 270

  Fly   440 YRGPTHFLQAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSE----TVVATI 500
                                .|||||.||.:|||:::||.|||..|::||...::    |:.|||
Mouse   271 --------------------VAEQLTYMDAQLFKKVVPHHCLGCIWSQRDKKENKHLAPTIRATI 315

  Fly   501 NQFNAVLFRVVSSILIDR-LKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSK 564
            :|||.:...|||::|..: ||.|:||..|.:||:||.|.|:|||||||:||:|||.|||||||.|
Mouse   316 SQFNTLTKCVVSTVLGSKELKTQQRARVIEKWINIAHECRILKNFSSLRAIVSALQSNSIYRLKK 380

  Fly   565 IWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAK--NPDPG-SDHSDRHLQKLILNLGT 626
            .|..:||:||.:|.||::|.|:.||..|.||:|.:|||:|  |.|.. .::..|..::|.|....
Mouse   381 AWAAVPKDRMLMFEELSDIFSDHNNHLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDM 445

  Fly   627 QTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADA 691
            ....||:||||||||||||:.||..||: |..||||:|:|:||||:|||||||.|.|:|.:..|.
Mouse   446 GVMQGTVPYLGTFLTDLTMLDTALQDYI-EGGLINFEKRRREFEVIAQIKLLQSACNSYCMGPDQ 509

  Fly   692 LFDHWFNSMPVFDEREAFELSCRLE------PPPPAPRKSVVSTNTSL------------TNTTA 738
            .|..||....:..|.|::.|||.:|      ...|.||||:|...:.|            |....
Mouse   510 KFIQWFQRQQLLSEEESYALSCEIEAAADANTTSPKPRKSMVKRLSLLFLGSDIIPGSTPTKEQP 574

  Fly   739 SSTASIMGHRKTDSIHSNSSSGAGSQFYCELNSSTSSRHNSLDRDVHHQ-HASLMSASSSVSNL- 801
            .|.||.......||:..:|         ||.|.|.:........|...: ...|..:|||.|:: 
Mouse   575 KSAASGSSGESMDSVSVSS---------CESNHSEAEEGPVTPMDTPDEPQKKLSESSSSCSSIH 630

  Fly   802 SLDSSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPSSGTPHSAPDFY------ 860
            |:|:::||         ..|:.|.|.|   ..|...:|.|:.:.|..:|.|....|..|      
Mouse   631 SMDTNSSG---------MSSLINPLSS---PPTCNNNPKIHKRSVSVTSITSTVLPPVYNQQNED 683

  Fly   861 --IIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLKLGLEDDP-DRFTLAQVL-PDKEL 921
              |||::.|.:|..     :||||||.:.::||.||:.||.|..||.|| :.:.|.||: .||||
Mouse   684 TCIIRISVEDNNGN-----MYKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISEDKEL 743

  Fly   922 VMPKNANVYYAVNTNYNLNFILRPRK--EEGVAGSXSTAVPL 961
            |:|.:|||:||:|:..|.:||||.:.  ||.|... .|::.|
Mouse   744 VIPDSANVFYAMNSQVNFDFILRKKNSVEEQVKLRSRTSLTL 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 46/135 (34%)
RasGEF 454..719 CDD:214539 135/278 (49%)
RA_RalGDS_like 858..946 CDD:340449 43/97 (44%)
Rgl1NP_001333046.1 RasGEFN 100..231 CDD:214571 49/142 (35%)
RasGEF 263..532 CDD:238087 134/299 (45%)
RA_RGL 682..768 CDD:340730 42/90 (47%)

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