DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and Ralgds

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_006497859.1 Gene:Ralgds / 19730 MGIID:107485 Length:908 Species:Mus musculus


Alignment Length:980 Identity:297/980 - (30%)
Similarity:445/980 - (45%) Gaps:249/980 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 RRSRSASAKPRRNSS--------YHSYDDLDVSSAVLNAERKVVASLKYLCACTGATLRNLSKKT 177
            |||||.....|....        .||:..||                        ..|..|...|
Mouse    24 RRSRSVWDAVRLEVGVPDSCPVVLHSFTQLD------------------------PDLPRLESST 64

  Fly   178 KDLHAKNYTYTKPTWRLWGEEHEKNAIFTVYLKKVRYHRPTPTASN--DSDDEISHLEWETVRVR 240
            :::               |||.....|:::.|:||:.|:.......  ..::|.:...:||.:||
Mouse    65 QEI---------------GEELINGVIYSISLRKVQLHQGATKGQRWLGCENESALNLYETCKVR 114

  Fly   241 FVKAATLARLVEALATDDGELESTFINVFLSTYRTFSTPKQVLSLL-TQRYDALHEKHLEELEQA 304
            .|||.||.:|||.|.......:.:::.|||.|||.|:|.:|||.|| ..||.     ..:.|..:
Mouse   115 TVKAGTLEKLVEHLVPAFQGSDLSYVTVFLCTYRAFTTTQQVLDLLFKSRYG-----RCDALTAS 174

  Fly   305 QQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDN----LQQILAFATKRLKRSDL 365
            .:.|.:: |.........:|.|..:.|.|..|||.:.||:.:..    |:|::|:....:..|||
Mouse   175 SRYGCIL-PYSSEDGGPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVAYVQLNMPGSDL 238

  Fly   366 ----HIKVLNRLERLIKQSLYGNGGGSGGSENNGHS---WLSAARSQQMQQFMI--PTHYGSSYD 421
                |: :|.:||.|....          :|:...|   .||...:.|::..::  |:...:|..
Mouse   239 ERRAHL-LLAQLEDLEPSE----------AESEALSPAPVLSLKPASQLEPALLLTPSQVVTSTP 292

  Fly   422 LTDQF------------------------------NGMYLSP-----------MGHGPIYRGPTH 445
            :.:..                              ..:.|:|           :...|:   ||.
Mouse   293 VREPAAAPVPVLASSPVVAPAPELEPVPEPPQEPEPSLALAPELEPAVSQSLELESAPV---PTP 354

  Fly   446 FLQ------------AFRFPHV---PVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSE- 494
            .|:            ....||:   |....|||.|.||.||||:::|:.|||..|::||..|.| 
Mouse   355 ALEPSWSLPEATENGLTEKPHLLLFPPDLVAEQFTLMDAELFKKVVPYHCLGSIWSQRDKKGKEH 419

  Fly   495 ---TVVATINQFNAVLFRVVSSILIDR-LKPQERALNISRWIDIAQELRMLKNFSSLKAIISALN 555
               |:.||:.|||.|...|:::.|.|: :|..:||..:..||::|:|.|.|||||||.||:|||.
Mouse   420 LAPTIRATVAQFNNVANCVITTCLGDQSMKAPDRARVVEHWIEVARECRALKNFSSLYAILSALQ 484

  Fly   556 SNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAK------NPDPGSDHSD 614
            ||:|:||.|.||.:.::...||.:|:.|.|::||....||:|.:|||:|      ||        
Mouse   485 SNAIHRLKKTWEEVSRDSFRVFQKLSEIFSDENNYSLSRELLIKEGTSKFATLEMNP-------- 541

  Fly   615 RHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQ 679
            |..|:.....|  ...||:||||||||||.|:.||..||| ..:||||:|:||||||:|||||||
Mouse   542 RRAQRRQKETG--VIQGTVPYLGTFLTDLVMLDTAMKDYL-YGRLINFEKRRKEFEVIAQIKLLQ 603

  Fly   680 GAANTYNLQADALFDHWFNSMPVFDEREAFELSCRLEPPPPAPRKSVVSTNTSL----------- 733
            .|.|.|::..:..|..||.:|....|.|::.|||.||||..:...::.|..::.           
Mouse   604 SACNNYSIAPEEHFGTWFRAMERLSEAESYTLSCELEPPSESASNTLRSKKSTAIVKRWSDRQAP 668

  Fly   734 -TNTTASSTASIMGHRK----------------TD--SIHSNSSSGAGSQFYCELNSS------- 772
             |..:.||:|    |.|                ||  |:||..||.:..:   |:|.|       
Mouse   669 STELSTSSSA----HSKSCDQLRCSPYLGSGDITDALSVHSAGSSSSDVE---EINMSFVPESPD 726

  Fly   773 -------TSSRHNSLDRDVHHQHASLMSASSSVSNLSLDSSNSGGRQSGKLTHSQSMGNGLKSHG 830
                   .|:..:|      .:.:.:.|||||.|:    ||.|....|...||.:|: :|:.|:.
Mouse   727 GQEKKFWESASQSS------PETSGISSASSSTSS----SSASTTPVSTTRTHKRSV-SGVCSYS 780

  Fly   831 NGTTNGGSPHINAQLVQPSSGTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIR 895
            :..     |..|.|:           .|..||||:.:.||..     :||||::.:.::.|.|||
Mouse   781 SSL-----PLYNQQV-----------GDCCIIRVSLDVDNGN-----MYKSILVTSQDKAPTVIR 824

  Fly   896 NAMLKLGL-EDDPDRFTLAQVL-PDKELVMPKNANVYYAVNTNYNLNFILRPR---KEEGVAGSX 955
            .||.|..| ||:|:.:.|.|:: .|.:|.:|:||||:||:|:..|.:|||:.|   |...|....
Mouse   825 KAMDKHNLDEDEPEDYELVQIISEDHKLKIPENANVFYAMNSTANYDFILKKRTFTKGAKVKHGA 889

  Fly   956 STAVP 960
            |:.:|
Mouse   890 SSTLP 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 44/140 (31%)
RasGEF 454..719 CDD:214539 129/278 (46%)
RalGDS_RA 858..946 CDD:176351 38/89 (43%)
RalgdsXP_006497859.1 RasGEFN 112..249 CDD:214571 46/143 (32%)
RasGEF 376..643 CDD:214539 128/277 (46%)
RA_RalGDS 792..877 CDD:340729 38/89 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 197 1.000 Domainoid score I3101
eggNOG 1 0.900 - - E1_KOG3629
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 387 1.000 Inparanoid score I2001
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45636
OrthoDB 1 1.010 - - D116220at33208
OrthoFinder 1 1.000 - - FOG0003345
OrthoInspector 1 1.000 - - otm43189
orthoMCL 1 0.900 - - OOG6_106137
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1296
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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