DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgl and Ralgdsl7

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_017453122.1 Gene:Ralgdsl7 / 102552619 RGDID:7567332 Length:206 Species:Rattus norvegicus


Alignment Length:114 Identity:33/114 - (28%)
Similarity:47/114 - (41%) Gaps:31/114 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALH 334
            ||.||..:||.|:|.||..|:..|                      .|::...||.|.||.|.|.
  Rat    90 LSAYRRIATPLQILDLLFVRHSYL----------------------SPYSKEDEQVKNTLWSFLE 132

  Fly   335 VWLDGFPEDWHED-------NLQQILAFATKRLKRSDLHIKVLNRLERL 376
            .|:|..|  |.:.       .||.:.|:.:..:..|||.::|...|.:|
  Rat   133 TWMDKNP--WMDFCDPSDMLPLQYLEAYLSVYIPNSDLIVRVKILLTQL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 33/114 (29%)
RasGEF 454..719 CDD:214539
RA_RalGDS_like 858..946 CDD:340449
Ralgdsl7XP_017453122.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.