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Protein Alignment Rgl and LOC102552619
DIOPT Version :9
Sequence 1: | NP_001261814.1 |
Gene: | Rgl / 44115 |
FlyBaseID: | FBgn0026376 |
Length: | 973 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017453122.1 |
Gene: | LOC102552619 / 102552619 |
RGDID: | 7567332 |
Length: | 206 |
Species: | Rattus norvegicus |
Alignment Length: | 114 |
Identity: | 33/114 - (28%) |
Similarity: | 47/114 - (41%) |
Gaps: | 31/114 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 270 LSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALH 334
||.||..:||.|:|.||..|:..| .|::...||.|.||.|.|.
Rat 90 LSAYRRIATPLQILDLLFVRHSYL----------------------SPYSKEDEQVKNTLWSFLE 132
Fly 335 VWLDGFPEDWHED-------NLQQILAFATKRLKRSDLHIKVLNRLERL 376
.|:|..| |.:. .||.:.|:.:..:..|||.::|...|.:|
Rat 133 TWMDKNP--WMDFCDPSDMLPLQYLEAYLSVYIPNSDLIVRVKILLTQL 179
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rgl | NP_001261814.1 |
REM |
246..378 |
CDD:100121 |
33/114 (29%) |
RasGEF |
454..719 |
CDD:214539 |
|
RalGDS_RA |
858..946 |
CDD:176351 |
|
LOC102552619 | XP_017453122.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3629 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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