DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgl and LOC101885008

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_009301754.2 Gene:LOC101885008 / 101885008 -ID:- Length:716 Species:Danio rerio


Alignment Length:763 Identity:246/763 - (32%)
Similarity:359/763 - (47%) Gaps:164/763 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 ESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHK 326
            :||::.:||.|||||:|.||||.||..||..|         |.|....|.....|....:    :
Zfish     9 DSTYVTIFLCTYRTFATTKQVLDLLLNRYAKL---------QQQPGPDVRRMTSDERTEL----R 60

  Fly   327 KTLVSALHVWLDGFPED-WHEDN---LQQILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGGG 387
            .|:.|.|..|||.:.|| |....   |::::.:.......|||..:..|.|...           
Zfish    61 NTISSILGAWLDQYSEDFWKPPEYSCLRRLILYLQINFPGSDLERRACNLLSHF----------- 114

  Fly   388 SGGSENNGHSWLSAARSQQMQQ----FMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQ 448
                    |..|..|....::|    |.:....|...:..|     :||                
Zfish   115 --------HRRLQHAEPDLLEQGCCAFSLLEENGFEEERPD-----FLS---------------- 150

  Fly   449 AFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSE----TVVATINQFNAVLFR 509
               |....|   |||.|.||.|||||::|:.|||..|::||..|.|    |:.||::|||.|...
Zfish   151 ---FDPTVV---AEQFTLMDAELFKRVVPYHCLGSIWSQRDKKGKEHLAPTIRATVSQFNRVTNC 209

  Fly   510 VVSSILIDR-LKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKIWEVLPKER 573
            .:::.|.|| ||...||..:..||.:|:|.|:|||||||:||:|||..|.::||.|.|:.:.:|.
Zfish   210 AIATCLSDRTLKHTHRARILEHWIQVARECRILKNFSSLRAILSALQCNPVHRLKKTWDEVSREN 274

  Fly   574 MEVFTELANICSEDNNAWTLREVLKREGTAK------NPDPGSDHSDRHLQKLILNLGTQTSHGT 632
            :.:|.||:.|.|::||....||:|.:|||:|      ||........|.|..:         .||
Zfish   275 LRIFQELSEIFSDENNHSLSRELLIKEGTSKFATLEINPKRAQKRQQRDLTVM---------QGT 330

  Fly   633 IPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADALFDHWF 697
            |||||||||||.|:.||..||| :..||||:|:||||||:|||||||.|.|.||.|..:.|..|.
Zfish   331 IPYLGTFLTDLVMMDTAMKDYL-DGGLINFEKRRKEFEVIAQIKLLQLACNNYNFQRVSGFSAWL 394

  Fly   698 NSMPVFDEREAFELSCRLEPPPPAPRKSVVSTNTS------------LTNTTASSTASIMGHRKT 750
            .|:....|.|::..||.:||...:...::.:..:|            .......|::|...|.|:
Zfish   395 CSVEKLSEAESYSQSCEIEPLSESASNTLRAKKSSGIMKRWSDRQPVCVGEAGCSSSSGSSHSKS 459

  Fly   751 -------------------DSIHSNSSSGAGSQFYCELN-SSTSSRHNSLDRD-----VHHQHAS 790
                               ||: |.:|:|:.|....|:| |.||...::.:|.     |.|.:::
Zfish   460 FDQLRFPVCVSGGSVCDGGDSV-SVTSAGSSSSDVEEVNISYTSESPDAPERKTSTPFVKHSNST 523

  Fly   791 LMSA------------SSSVSNLSLDSSNSGGRQSGKLTHS-----QSMGNGLKSHGNGTTNGGS 838
            |...            |:|:|:|...:..||...|...:.|     .|:....|...:|.::..|
Zfish   524 LGKCGPSGDLIPTFWESTSLSSLDASALGSGSGSSSASSSSVSSTPVSVSRSHKRSASGVSSYSS 588

  Fly   839 ---PHINAQLVQPSSGTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLK 900
               |..|.|:           .|..||||:.:.||..     :||||::.:.::||.|:|.||:|
Zfish   589 LSLPLYNQQV-----------DDCCIIRVSLDVDNGN-----MYKSILVTSQDKTPAVVRKAMVK 637

  Fly   901 LGLE-DDPDRFTLAQ-VLPDKELVMPKNANVYYAVNTNYNLNFILRPR 946
            ..|: :..:.:.|.| :..:|||.:|.||||:||:|:..|.:|:|:.|
Zfish   638 HNLDRERAEDYELVQKISEEKELKIPDNANVFYAMNSTANYDFVLKKR 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 38/119 (32%)
RasGEF 454..719 CDD:214539 127/275 (46%)
RalGDS_RA 858..946 CDD:176351 35/89 (39%)
LOC101885008XP_009301754.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D116220at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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