DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgl and LOC101885008

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_073791671.1 Gene:LOC101885008 / 101885008 -ID:- Length:784 Species:Danio rerio


Alignment Length:829 Identity:268/829 - (32%)
Similarity:397/829 - (47%) Gaps:169/829 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 GEEHEKNAIFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARLVEALATDDGE 260
            |||.|:.|:|::.::||:.::     |:.|..:..|.:..|.::|.:||.||.||||.:.|....
Zfish    16 GEEVEEGAVFSITVRKVQVYQ-----SSSSRGQQQHSDSHTCKLRSIKAGTLERLVENMLTAFRG 75

  Fly   261 LESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQH 325
            .:||::.:||.|||||:|.||||.||..||..|         |.|....|.....|....:    
Zfish    76 NDSTYVTIFLCTYRTFATTKQVLDLLLNRYAKL---------QQQPGPDVRRMTSDERTEL---- 127

  Fly   326 KKTLVSALHVWLDGFPED-WHEDN---LQQILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGG 386
            :.|:.|.|..|||.:.|| |....   |::::.:.......|||..:..|.|...          
Zfish   128 RNTISSILGAWLDQYSEDFWKPPEYSCLRRLILYLQINFPGSDLERRACNLLSHF---------- 182

  Fly   387 GSGGSENNGHSWLSAARSQQMQQ----FMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFL 447
                     |..|..|....::|    |.:....|...:..|     :||               
Zfish   183 ---------HRRLQHAEPDLLEQGCCAFSLLEENGFEEERPD-----FLS--------------- 218

  Fly   448 QAFRFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSE----TVVATINQFNAVLF 508
                |....|   |||.|.||.|||||::|:.|||..|::||..|.|    |:.||::|||.|..
Zfish   219 ----FDPTVV---AEQFTLMDAELFKRVVPYHCLGSIWSQRDKKGKEHLAPTIRATVSQFNRVTN 276

  Fly   509 RVVSSILIDR-LKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKIWEVLPKE 572
            ..:::.|.|| ||...||..:..||.:|:|.|:|||||||:||:|||..|.::||.|.|:.:.:|
Zfish   277 CAIATCLSDRTLKHTHRARILEHWIQVARECRILKNFSSLRAILSALQCNPVHRLKKTWDEVSRE 341

  Fly   573 RMEVFTELANICSEDNNAWTLREVLKREGTAK------NPDPGSDHSDRHLQKLILNLGTQTSHG 631
            .:.:|.||:.|.|::||....||:|.:|||:|      ||........|.|..:         .|
Zfish   342 NLRIFQELSEIFSDENNHSLSRELLIKEGTSKFATLEINPKRAQKRQQRDLTVM---------QG 397

  Fly   632 TIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADALFDHW 696
            ||||||||||||.|:.||..||| :..||||:|:||||||:|||||||.|.|.||.|..:.|..|
Zfish   398 TIPYLGTFLTDLVMMDTAMKDYL-DGGLINFEKRRKEFEVIAQIKLLQLACNNYNFQRVSGFSAW 461

  Fly   697 FNSMPVFDEREAFELSCRLEPPPPAPRKSVVSTNTS------------LTNTTASSTASIMGHRK 749
            ..|:....|.|::..||.:||...:...::.:..:|            .......|::|...|.|
Zfish   462 LCSVEKLSEAESYSQSCEIEPLSESASNTLRAKKSSGIMKRWSDRQPVCVGEAGCSSSSGSSHSK 526

  Fly   750 T-------------------DSIHSNSSSGAGSQFYCELN-SSTSSRHNSLDRD-----VHHQHA 789
            :                   ||: |.:|:|:.|....|:| |.||...::.:|.     |.|.::
Zfish   527 SFDQLRFPVCVSGGSVCDGGDSV-SVTSAGSSSSDVEEVNISYTSESPDAPERKTSTPFVKHSNS 590

  Fly   790 SLMSA------------SSSVSNLSLDSSNSGGRQSGKLTHS-----QSMGNGLKSHGNGTTNGG 837
            :|...            |:|:|:|...:..||...|...:.|     .|:....|...:|.::..
Zfish   591 TLGKCGPSGDLIPTFWESTSLSSLDASALGSGSGSSSASSSSVSSTPVSVSRSHKRSASGVSSYS 655

  Fly   838 S---PHINAQLVQPSSGTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAML 899
            |   |..|.|:           .|..||||:.:.||..     :||||::.:.::||.|:|.||:
Zfish   656 SLSLPLYNQQV-----------DDCCIIRVSLDVDNGN-----MYKSILVTSQDKTPAVVRKAMV 704

  Fly   900 KLGLE-DDPDRFTLAQ-VLPDKELVMPKNANVYYAVNTNYNLNFILRPR 946
            |..|: :..:.:.|.| :..:|||.:|.||||:||:|:..|.:|:|:.|
Zfish   705 KHNLDRERAEDYELVQKISEEKELKIPDNANVFYAMNSTANYDFVLKKR 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 45/135 (33%)
RasGEF 454..719 CDD:214539 127/275 (46%)
RA_RalGDS_like 858..946 CDD:340449 35/89 (39%)
LOC101885008XP_073791671.1 None

Return to query results.
Submit another query.