DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and LOC101884125

DIOPT Version :9

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_021327881.1 Gene:LOC101884125 / 101884125 -ID:- Length:339 Species:Danio rerio


Alignment Length:411 Identity:121/411 - (29%)
Similarity:190/411 - (46%) Gaps:95/411 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 WRL-------WGEEHEKNAIFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLAR 249
            |.|       ||||||..|:|.|.|::    .|...::..::   :.:.:.|.:||.:|||||.:
Zfish     4 WELTMEPVQEWGEEHEDGAVFGVTLRR----EPVQQSAEPTE---AFVHYRTCKVRRLKAATLDK 61

  Fly   250 LVEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPA 314
            ||..| .|....|..:..:.|||||:|::..:::..|.||      |:|         ..|:|..
Zfish    62 LVSHL-LDPCCQEQDYSCIMLSTYRSFTSTNKLIETLFQR------KNL---------ASVLDSI 110

  Fly   315 YDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQQILAFATKRLKRSDLHIKVLNRLERLIKQ 379
            ..|::        .|.:.|.:|||.:.||:.:..:...|.....:|:.......:..:.|.|:|:
Zfish   111 NYPNS--------CLWTVLQLWLDEYSEDFRDSPMHSSLRLMCLKLRGHPSLFPLAKQYEALLKR 167

  Fly   380 SLYGNGGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPT 444
            .                         |.:..:...    |.|||::.| :.:.            
Zfish   168 F-------------------------QTEDVVAAV----SADLTEESN-LNME------------ 190

  Fly   445 HFLQAFRFPHV------PVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGG--SETVVATIN 501
              ::.|.|.::      .:...||||||:|.:||.:::|.||||..|::||...  |.:|.|||.
Zfish   191 --MRNFEFDNMEDFLDFSIMGVAEQLTRIDADLFVKVVPFQCLGCVWSQRDKNENLSPSVWATIT 253

  Fly   502 QFNAVLFRVVSSILIDRLK-PQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSKI 565
            |||||..||::|:|..... ..:||..|.:|:.:||..|.||||||||||:|||.||.:|||.|.
Zfish   254 QFNAVTNRVITSLLNSPTSTASQRARVIEKWVRVAQGCRELKNFSSLKAILSALQSNPVYRLRKT 318

  Fly   566 WEVLPKERMEVFTELANICSE 586
            |..:.:.|....|    :|.:
Zfish   319 WAAVSRYRQTTHT----LCRQ 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 32/131 (24%)
RasGEF 454..719 CDD:214539 61/142 (43%)
RalGDS_RA 858..946 CDD:176351
LOC101884125XP_021327881.1 RasGEF_N 53..148 CDD:306971 32/118 (27%)
RasGEF 202..>334 CDD:321950 60/135 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D116220at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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