DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgl and rapgef5

DIOPT Version :10

Sequence 1:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_031759509.1 Gene:rapgef5 / 100494102 XenbaseID:XB-GENE-876513 Length:900 Species:Xenopus tropicalis


Alignment Length:678 Identity:150/678 - (22%)
Similarity:248/678 - (36%) Gaps:192/678 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 AERKVVASLKYLCACTGAT-------LRNLSKKTKDLHAKNYTYTKPTWRLWGEEHEKNAIF--- 205
            ||....|....:|...|..       ::.|.::::.|.:.:   ..|..:|..:|.|.....   
 Frog   302 AEHAAEAEAGVMCKLHGREEFRRIDFVQKLKRESQFLPSAS---KLPDKKLQQDEEESTVQVKEE 363

  Fly   206 ---TVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARLVEALATDDGELE--STF 265
               .:.||||....|.|||.:..:|      |..:.|.......|..|:..|..|:.:.:  .|.
 Frog   364 DQDVLVLKKVLSESPAPTAGSAEND------WRYMVVSGTPEKILEHLLNDLHLDEVQDKDTDTL 422

  Fly   266 INVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEELEQAQQNGQVMDPAYDPHASIHEQHKKTLV 330
            ::.||.||..|.|...:...|.:.|.|           |:.:|:    |..|.|...::....|.
 Frog   423 LDDFLLTYTVFMTTDDLCKALLRHYCA-----------AKYDGK----AESPEALCTKRKVLLLA 472

  Fly   331 S---ALHVWLDGFPEDW-HEDNLQQILAFATKRLKRSDLHIKVLNR-----------LERLIKQ- 379
            |   ||:       :|| |||             :.|.|.:|.|.|           ||:.:|: 
 Frog   473 SQWTALY-------KDWLHED-------------EHSKLFLKTLYRYVLDDVYEYPILEKELKEF 517

  Fly   380 ----------------------------SLYGNGGGSGGSEN-----------NGHSWLS----- 400
                                        ||..|.....|:.|           ..||::|     
 Frog   518 QKVLRIHRRHTVDEYSPHRKNKALFHQFSLKENWLQHRGNANEIEEIFCRVYITDHSYVSIRAKV 582

  Fly   401 -----------AARSQQMQQ---FMIPTHYGSSYDLTDQFNGMYLS----PMGHGPIYR-----G 442
                       |.|.|..::   .:..|:.|...:|..  |.:.||    |......||     .
 Frog   583 SSSAQDILKIVAERIQLSEEDLALVTVTYCGEKQELLP--NELVLSKSLEPSSRIYTYRKSDTLN 645

  Fly   443 PTHFLQAFRFPHVPVR-------HFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSETVVATI 500
            |  |.:.....|..||       ..|.:||..|..||..:...:.:..|::|:..|.:...::.:
 Frog   646 P--FAENEETQHRSVRLLGINTWDIAFELTSFDWSLFNSIHEQELIYFTFSRQGKGENTLNLSLL 708

  Fly   501 NQ-FNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLSK 564
            .| .|.|...|.:.||:.. :|.:|...:.::|.||...:..:|.:|..|||..||:.|:.|||:
 Frog   709 LQRCNEVQLWVATEILLCN-QPGKRVQLLKKFIKIAAHCKAQRNLNSFFAIIMGLNTASVSRLSQ 772

  Fly   565 IWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQKLILNLGTQTS 629
            .||.:|.:..::|:||.::.....|....|:..|:....|                         
 Frog   773 TWEKIPGKFKKLFSELESLTDPSLNHKAYRDAFKKMKPPK------------------------- 812

  Fly   630 HGTIPYLGTFLTDLTMIHTANPDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNL----QAD 690
               ||::...|.|:|.||..|..:|  :.|:||:|.....:.:..::..:......:|    :.:
 Frog   813 ---IPFMPLLLKDVTFIHEGNKTFL--DNLVNFEKLHMIADAVRSVRYCRNNQFGNDLPQKERQE 872

  Fly   691 ALFDHWFNSMPVFDEREA-FELSCRLEP 717
            |.|  :.|.:.|.|.::. ||||.|:||
 Frog   873 AKF--YSNHLHVIDNQQTLFELSHRIEP 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RglNP_001261814.1 REM 246..378 CDD:100121 35/148 (24%)
RasGEF 454..719 CDD:214539 70/277 (25%)
RA_RalGDS_like 858..946 CDD:340449
rapgef5XP_031759509.1 DEP_Epac 116..239 CDD:239884
RasGEFN 390..522 CDD:214571 37/166 (22%)
Ubl1_cv_Nsp3_N-like 565..642 CDD:475130 15/78 (19%)
RasGEF 660..900 CDD:214539 67/272 (25%)
Blue background indicates that the domain is not in the aligned region.

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