DRSC/TRiP Functional Genomics Resources

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Protein Alignment slpr and grapb

DIOPT Version :10

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001025251.2 Gene:grapb / 555184 ZFINID:ZDB-GENE-050913-4 Length:214 Species:Danio rerio


Alignment Length:228 Identity:44/228 - (19%)
Similarity:84/228 - (36%) Gaps:79/228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ALYDYDAQGEDELTLRRGEIVVVLSTDSEVSGDVGWWTGKIGDKVGVFPKDFV------------ 102
            |||.:.|...|||:.::|||:.|.:.|.    |..|:|.::..:.|..||:::            
Zfish     5 ALYSFRATECDELSFQKGEILKVTNMDD----DPNWYTAELLGRRGYVPKNYINVRPHTWFVGGI 65

  Fly   103 ---------------------TDEDPLQLNVSSAIGD-IQPHEIEYNELDIKEVIGSGGFCKVHR 145
                                 ::..|.:.:||.:.|| :|..::      :|:.:|.        
Zfish    66 SRQAAENRLRPLECGAFLIRESESTPGEFSVSVSYGDHVQHFKV------LKDGLGQ-------- 116

  Fly   146 GYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAA-------------------- 190
             |:..:||...:....   |..|: :::.:|..:|......::|.                    
Zfish   117 -YFIWDEVFSSLNQLV---DFYRI-NSIAKERTVFLREPEGSLARPRHAHAIFDFTSNHVTHLRF 176

  Fly   191 LRGVCLNTKLCLVMEYARGGSLNRILAGKIPPD 223
            |||..::...|...:..||....|:  |..||:
Zfish   177 LRGDVIDLLDCSDAQCWRGRCRGRV--GIFPPE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 18/86 (21%)
STKc_MLK 134..389 CDD:270963 19/110 (17%)
grapbNP_001025251.2 SH3 2..55 CDD:473055 18/53 (34%)
SH2_Grb2_like 56..149 CDD:199828 15/111 (14%)
SH3 159..211 CDD:473055 10/51 (20%)

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