DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and Abl

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster


Alignment Length:1406 Identity:289/1406 - (20%)
Similarity:444/1406 - (31%) Gaps:498/1406 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISEEQQLQQQQQQ-------------------QQLEQLHHPQIPE---IPIPDLEQVETQVGDGS 46
            :::..:|||.||.                   ...|..|.....|   .|.|:.:       |..
  Fly   151 LADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEED-------DPQ 208

  Fly    47 LWTALYDYDAQGEDELTLRRGEIVVVLSTDS--------EVSGDVGWWTGKIGDKVGVFPKDFVT 103
            |:.||||:.|.||::|:|::||.|.:||.:.        ..||:|||           .|.::||
  Fly   209 LFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGW-----------VPSNYVT 262

  Fly   104 -------------------------------------DEDPLQLNVS------------------ 113
                                                 :..|.|.::|                  
  Fly   263 PLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRISEDPDG 327

  Fly   114 ----------SAIGDI----------------------------------QPHEIEYNELDI--K 132
                      :.:.::                                  :|.|.|....||  |
  Fly   328 KVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMK 392

  Fly   133 EVIGSGGFCKVHRGYYD--GEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVC 195
            ..:|.|.:.:|:...:.  |..||:|    |.::|...::| .|:||.:...:||.|:..|.|||
  Fly   393 HKLGGGQYGEVYEAVWKRYGNTVAVK----TLKEDTMALKD-FLEEAAIMKEMKHPNLVQLIGVC 452

  Fly   196 L-NTKLCLVMEYARGGSLNRIL--AGKIPPD--VLVNWAIQIARGMNYLHNEAPMSIIHRDLKSS 255
            . .....::.|:...|:|...|  ||:...|  .|:..|.|||.||:||.:.   :.|||||.:.
  Fly   453 TREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESR---NYIHRDLAAR 514

  Fly   256 NVLIYEAIEGNHLQQKTLKITDFGLAREMYNTQRMSAAGT---YAWMPPEVISVSTYSKFSDVWS 317
            |.|:.:        .|.:|:.||||||.|.:....:.||.   ..|..||.::.:.:|..||||:
  Fly   515 NCLVGD--------NKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWA 571

  Fly   318 YGVLLWELIT-GETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKE 381
            :||||||:.| |.:||...| |:..|........:..|..||.....||:.|||.|...||.||.
  Fly   572 FGVLLWEIATYGMSPYPAID-LTDVYHKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKS 635

  Fly   382 ILKQLESIACSKFTLTPQESFHYMQECWRKEIAGVLHDLREKEKRFQTIEEELRNKEEQLLRVQN 446
            |...||               |..||                    .:|.|.:   |:||     
  Fly   636 IHHALE---------------HMFQE--------------------SSITEAV---EKQL----- 657

  Fly   447 EQREKANLLKIREQNLRERERVLIERELVMLQPVPSKRKHKKGKKNKPLQISLPTGFRHTITAVR 511
                .||.                                .....:.|....:.||...|.|...
  Fly   658 ----NANA--------------------------------TSASSSAPSTSGVATGGGATTTTAA 686

  Fly   512 DKAEQPGSPSFSGLRIVALTDG--HKGKTWG----PSTMH---QRERSLLPSQLSGGQPEWPAQT 567
            .......|.:.|    ::||..  .||...|    |:..|   .::::..|...:|       .|
  Fly   687 SGCASSSSATAS----LSLTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETG-------ST 740

  Fly   568 STH-SSFSKSAPNLDKKQQQQNQQQVASLTPPPGLGILGGSGGAGGTPATPLLYPGIPIILTRPN 631
            ||. |:||.......:.::..|:|...:..||....:|..|                        
  Fly   741 STKLSTFSSQGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSS------------------------ 781

  Fly   632 NNNIGNCKAITTTITTTTTTTTNNNNNNNNSISANNNNQLNNISTIN----SNNNNNQTNL-TSQ 691
                          ..:|....:..|...|.|...:.|.::.:.|.|    :.:.|.:|.: |..
  Fly   782 --------------RDSTYREEDPANARCNFIDDLSTNGIHKLKTANYFSQTLSRNFKTQIPTHH 832

  Fly   692 PNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQEYGLDHPLAYQPPPLYLVTDDS---------- 746
            .:.|...|..:..|........|..:..:|..|:         |....|.:...|          
  Fly   833 THQIRTQQQQQQQSVQQQQQIVPLSVQQQAHQQQ---------QKQQQYSIKKSSSCSSFLYDIL 888

  Fly   747 ----------------SETDTVASP----TGCFHFLKSGNSSAASGAV------HLHRFGGSLGN 785
                            ||||..|.|    ||  ..|:...|...:..|      .||..||..| 
  Fly   889 FRGLARDINSLTQRYDSETDPAADPDTDATG--DSLEQSLSQVIAAPVTNKMQHSLHSGGGGGG- 950

  Fly   786 SPAVGRKKHSLDSSSHHP---PANG--------SNSFALPNQLTLPSEDNNTYDHAFYRDVIKKM 839
               :|.:.....||...|   |..|        |....|.:|...|...:....|          
  Fly   951 ---IGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQLHSQAPGPGPPSTQPHH---------- 1002

  Fly   840 SMASSERVNSKSSGDLTMYNSSTPLTARDCDDAEEAFEGGRFQRNFSGSQFPRHCFFTRQEEEGE 904
                         |:..:..|:.|:|....|.........|:.....|::.  ..:....|:..|
  Fly  1003 -------------GNNGVVTSAHPITVGALDVMNVKQVVNRYGTLPKGARI--GAYLDSLEDSSE 1052

  Fly   905 AEDE-DAVAAEVDTADADADDEC--------QVPASQM-RQNSTTSRKSSVTFQSVSFEEPDFVA 959
            |... .|.|..:..|:..|....        .:|..|| |.||:    ..||.|:.:....:.:.
  Fly  1053 AAPALPATAPSLPPANGHATPPAARLNPKASPIPPQQMIRSNSS----GGVTMQNNAAASLNKLQ 1113

  Fly   960 TPRTTARSDLYTSSASISFATYR----SASPSLSSSSTTASASPSIASTEAVNGYHMQENSILNT 1020
            ..|||      |....::|:::|    |:||..|:|...:...|::|:.|.             .
  Fly  1114 RHRTT------TEGTMMTFSSFRAGGSSSSPKRSASGVASGVQPALANLEF-------------P 1159

  Fly  1021 RRMQDVQPHPDVIK------LRAQEQRQQTKNQ--KKQRPKHITKSKSVEAPVEGQHHEHDDHND 1077
            ....|:.|.|:..:      ..|.|...|...|  ..|.|.:...|..     .|.::....|||
  Fly  1160 PPPLDLPPPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGNISNG-----NGTNNNDSSHND 1219

  Fly  1078 PQHQHHSAGSSKIRALFNLFTRSRK----------------------------KYSKLAEHNMVG 1114
            ..:...|...:..|  |.:..|.|:                            |.:..|.| :..
  Fly  1220 VSNIAPSVEEASSR--FGVSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKDTAPASH-LAN 1281

  Fly  1115 GPEFCAIDPYQ---TDLAMGGSSRSLKRKGKKPQTQSCEQL 1152
            |.....:||..   |:||   .|.:|    .||..|..::|
  Fly  1282 GSGIAVVDPVSLLVTELA---ESMNL----PKPPPQQQQKL 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 23/101 (23%)
TyrKc 129..386 CDD:197581 92/269 (34%)
STKc_MLK 134..389 CDD:270963 91/265 (34%)
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 22/64 (34%)
SH2_ABL 268..363 CDD:198189 3/94 (3%)
PTKc_Abl 382..644 CDD:270645 96/293 (33%)
Pkinase_Tyr 389..640 CDD:285015 91/267 (34%)
FABD 1584..1723 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2536
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
32.900

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