DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and Tnni3k

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_796040.3 Gene:Tnni3k / 435766 MGIID:2443276 Length:834 Species:Mus musculus


Alignment Length:391 Identity:108/391 - (27%)
Similarity:172/391 - (43%) Gaps:84/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 VVLSTDSEVSGD------VGWWTGKIGDKVGVFPKDFVTDEDPLQLN-------------VSSAI 116
            :|....|..||:      :.|...|..|.:....|.:...:|.|..|             |.|.:
Mouse   367 LVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRPQDELPCNEYSQPGGDGSYVSVPSPL 431

  Fly   117 GDIQP------------------HEIEYNELDIKEVIGSGGFCKVHRGYYDGEEVAIKIAHQTGE 163
            |.|:.                  ..::.:|::..|:||||.|.||::|....:.||||       
Mouse   432 GKIKSMTKEKADVLLLRAELPSRFHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIK------- 489

  Fly   164 DDMQRMRDNV----------LQEAKLFWALKHENIAALRGVCLN--TKLCLVMEYARGGSL---- 212
                |.|.|.          .:|..:...|.|..:....|.||:  ::..:|.:|..||||    
Mouse   490 ----RYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLL 550

  Fly   213 ---NRILAGKIPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLK 274
               .|||  .:...:::  |:.:|:||.|||: ....||||||.|.|:|:||  :|:.:      
Mouse   551 HEQKRIL--DLQSKLII--AVDVAKGMEYLHS-LTQPIIHRDLNSHNILLYE--DGHAV------ 602

  Fly   275 ITDFGLAREMYNTQR---MSAAGTYAWMPPEVISVST-YSKFSDVWSYGVLLWELITGETPYKGF 335
            :.|||.:|.:.:...   ....|...||.|||.:..| |:..:||:||.:.||||:|||.|:...
Mouse   603 VADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLTGEIPFAHL 667

  Fly   336 DPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLESIACSKFTLTPQE 400
            .|.:.|..:|.:.:..||..:.|:...:|:...|...|..||.|.|::::||...|:...::|..
Mouse   668 KPAAAAADMAYHHIRPPIGYSIPKPISSLLMRGWNACPEGRPEFSEVVRKLEECLCNVELMSPAS 732

  Fly   401 S 401
            |
Mouse   733 S 733

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 8/38 (21%)
TyrKc 129..386 CDD:197581 87/279 (31%)
STKc_MLK 134..389 CDD:270963 88/277 (32%)
Tnni3kNP_796040.3 ANK repeat 66..98 CDD:293786
ANK 1 66..96
Ank_2 71..164 CDD:289560
ANK 99..220 CDD:238125
ANK repeat 100..131 CDD:293786
ANK 2 100..129
ANK 3 133..162
ANK repeat 134..164 CDD:293786
Ank_2 138..231 CDD:289560
ANK 161..289 CDD:238125
ANK repeat 166..197 CDD:293786
ANK 4 166..195
ANK repeat 199..231 CDD:293786
ANK 5 199..229
ANK 228..359 CDD:238125
ANK 6 233..262
Ank_4 237..286 CDD:290365
ANK repeat 268..301 CDD:293786
ANK 7 268..297