DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and Abl2

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_038946666.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1188 Species:Rattus norvegicus


Alignment Length:1029 Identity:228/1029 - (22%)
Similarity:372/1029 - (36%) Gaps:332/1029 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DGSLWTALYDYDAQGEDELTLRRGEIVVVLSTDSEVSGDVGWWT---GKIGDKVGVFPKDFVT-- 103
            |.:|:.||||:.|.|::.|::.:||.:.||..:..     |.|:   .|.|.  |..|.:::|  
  Rat   108 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQN-----GEWSEVRSKNGQ--GWVPSNYITPV 165

  Fly   104 -----------------------------------DEDPLQLNVS-------------------- 113
                                               :..|.||::|                    
  Rat   166 NSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTTDSKV 230

  Fly   114 --------SAIGDIQPH----------------------------------EIEYNELDIKEVIG 136
                    |.:.::..|                                  |:|..::.:|..:|
  Rat   231 YVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKPTVYGVSPIHDKWEMERTDITMKHKLG 295

  Fly   137 SGGFCKVHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVC-LNTKL 200
            .|.:.:|:.|.:  ::.::.:|.:|.::|...: :..|:||.:...:||.|:..|.||| |....
  Rat   296 GGQYGEVYVGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPF 357

  Fly   201 CLVMEYARGGSLNRIL----AGKIPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYE 261
            .:|.||...|:|...|    ..::...||:..|.||:..|.||..:   :.|||||.:.|.|:.|
  Rat   358 YIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE 419

  Fly   262 AIEGNHLQQKTLKITDFGLAREMYNTQRMSAAGT---YAWMPPEVISVSTYSKFSDVWSYGVLLW 323
                ||:    :|:.||||:|.|......:.||.   ..|..||.::.:|:|..||||::|||||
  Rat   420 ----NHV----VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLW 476

  Fly   324 ELIT-GETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLE 387
            |:.| |.:||.|.| ||..|.:......:..|:.||.....||::||:..|..||.|.|..:..|
  Rat   477 EIATYGMSPYPGID-LSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 540

  Fly   388 SIACSKFTLTPQESFHYMQECWRK--------EIAGVLHDLREKEKRFQTIEEELRNKE------ 438
            ::....   :..|.|.:..|...:        .:...|..|.....:.:|::::..|||      
  Rat   541 TMFHDS---SISEDFVFFTEVAEELGRTASSSSVVPYLPRLPLLPSKTRTLKKQGENKENLDGGL 602

  Fly   439 --EQLL--------------------RVQNEQREK--ANLLKIREQNLRERER-------VLIER 472
              .::|                    .:..:||:|  ::||:..::....|:|       .:.:|
  Rat   603 DASEILASSSAPAGFIRSTQASSGSPALPRKQRDKSPSSLLEDAKETCFTRDRKGGFFSSFMKKR 667

  Fly   473 ELVMLQPVPSKRK----------HKK----GKKNKPLQISLPTGFRHT----------------- 506
            .    .|:|.||.          |||    |..:....:....||..|                 
  Rat   668 N----APMPPKRSSSFREMENQPHKKYELTGNFSPVASLQHADGFSFTPGQQESNLVPAKCYGGS 728

  Fly   507 -----ITAVRDKAEQPGSPS----FSGL------RIVALTDG-HKGK-TWGPSTMHQRERSLLPS 554
                 :....|.....||.:    :||:      |::..|.| ..|| |....|.....||...|
  Rat   729 FAQRNLCGDDDSGGGGGSGTAAGGWSGITGFFTPRLIKKTLGLRAGKPTASDDTSKPFPRSNSTS 793

  Fly   555 QLSGGQPEWP--AQT-------------STHSSFSKSAPNLD-------KKQQQ----QNQQQVA 593
            .:|.|.||..  |.|             .|.|:.|:...|:|       ||.::    ..::..|
  Rat   794 SMSSGLPEQDRMAMTLPRNCQRSKLQLERTVSTSSQPEENVDRANDMLPKKSEEGAAPARERPKA 858

  Fly   594 SLTPP-------------------PGLGILG------GSGGAGGTPATPLLYPGIPIILTRPNNN 633
            .|.|.                   ||:|:.|      |....||   |.|...|:|....:|..:
  Rat   859 KLLPRGATALALRAPDPAITESDCPGVGVAGVAAAPKGKERNGG---TRLGVAGVPEDAEQPGWS 920

  Fly   634 NIGNCKAITTTITTTTTTTTNNNNNNNNSISANNNNQLNNISTINSNNNNNQTNLTSQPNTIIVL 698
            :  ..||:....||       :|:.....||....:...::..|.:::..|:..|.|:       
  Rat   921 S--PAKAVAVLPTT-------HNHKVPVLISPTLKHTAADVQLIGTDSQGNKFKLLSE------- 969

  Fly   699 QNGRNNSNSSTTSQSPAKIYHRARSQEYGLDHPLAYQPPPLYLV-----TDDSSETDTVASPTGC 758
                :...||.....|.::..:.           |..|||:..:     |....|.:..|.|.| 
  Rat   970 ----HQVTSSGDKDRPRRVKPKC-----------APPPPPVMRLLQHPSTCSDPEEEPTAPPAG- 1018

  Fly   759 FHF--LKSGNSSAASGAVHLHRFGGSLGNSPAVGRKKHSLDSSSHHPP--ANGS 808
            .|.  .:.|...||.|.|   ...|..|. |.:...:..|.:||..|.  |||:
  Rat  1019 QHTPDTQDGGKKAAPGPV---PSSGKPGR-PVMPPPQVPLPTSSISPAKMANGT 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 19/96 (20%)
TyrKc 129..386 CDD:197581 88/265 (33%)
STKc_MLK 134..389 CDD:270963 88/263 (33%)
Abl2XP_038946666.1 SH3_Abl 111..164 CDD:212784 18/59 (31%)
SH2_ABL 169..262 CDD:198189 6/92 (7%)
PTKc_Abl 281..543 CDD:270645 91/276 (33%)
FABD 1069..1188 CDD:197885 228/1029 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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