DRSC/TRiP Functional Genomics Resources

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Protein Alignment slpr and abl-1

DIOPT Version :10

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_509778.2 Gene:abl-1 / 181261 WormBaseID:WBGene00000018 Length:1224 Species:Caenorhabditis elegans


Alignment Length:1152 Identity:245/1152 - (21%)
Similarity:402/1152 - (34%) Gaps:366/1152 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IPDLEQVETQVGDGS-LWTALYDYDAQGEDELTLRRGEIVVVL--------------------ST 75
            :.|:..|.:.....: |:.||||:...||::|:||:|:.|.:|                    ::
 Worm   103 VHDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDAS 167

  Fly    76 DSEVSGDVG-----------------WWTGKIG----------------------DKVGVF---- 97
            :....|::|                 |:.|||.                      ..:|.:    
 Worm   168 NQRRLGEIGWVPSNFIAPYNSLDKYTWYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISV 232

  Fly    98 ----------------PKDFVTDE-----------------DPL---------QLNVSSAIGDIQ 120
                            .|.|:|.|                 |.|         :.:....:..:.
 Worm   233 RHDGRVFHYRINVDNTEKMFITQEVKFRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLS 297

  Fly   121 PHEIEYNELDIKEVI-----GSGGFCKVHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLF 180
            |:..:..|||..|:|     |.|.:..|:.||:...:..|.:  :..::|...:.: .|.||.:.
 Worm   298 PNAPDEWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAV--KALKEDAMPLHE-FLAEAAIM 359

  Fly   181 WALKHENIAALRGVCLN-TKLCLVMEYARGGS----LNRILAGKIPPDVLVNWAIQIARGMNYLH 240
            ..|.|:|:..|.|||.: ....::.|:...|:    |.|.....:||.:||..|.|||.||:|| 
 Worm   360 KDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYL- 423

  Fly   241 NEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLKITDFGLAREMYNTQRMSAAGT---YAWMPPE 302
             || ...|||||.:.|.|:.|        ...:||.||||||.|......:.||.   ..|..||
 Worm   424 -EA-RHFIHRDLAARNCLVSE--------HNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPE 478

  Fly   303 VISVSTYSKFSDVWSYGVLLWELIT-GETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMK 366
            .::.:|:|..||||::||||||:.| |..||.|.: ||..||:..|...:..|:.||.:...||.
 Worm   479 GLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVE-LSNVYGLLENGFRMDGPQGCPPSVYRLML 542

  Fly   367 SCWQTDPHKRPGFKEILKQLESIACSKFTLTPQESFHYMQECWRKEIAGVLHDLREKEKRFQTIE 431
            .||...|..||.|::|...||::..|                                       
 Worm   543 QCWNWSPSDRPRFRDIHFNLENLISS--------------------------------------- 568

  Fly   432 EELRNKEEQLLRVQNEQREKANLLKIREQNLRERERVLIERELVMLQPVPSKRKHKKGKKNKPLQ 496
            ..|.::.::.|:..|:::.:::.   |..|:|||.              .||.:|.........:
 Worm   569 NSLNDEVQKQLKKNNDKKLESDK---RRSNVRERS--------------DSKSRHSSHHDRDRDR 616

  Fly   497 ISLPTGFRHTITAVRDKAEQPGSPSFSGLRIVALTDGHKGKTWGPSTMHQRERSLLPSQLSGGQP 561
            .||           ..:...|..|:.|.:|    || .....:.|||     .|.:.|..:.|.|
 Worm   617 ESL-----------HSRNSNPEIPNRSFIR----TD-DSVSFFNPST-----TSKVTSFRAQGPP 660

  Fly   562 -EWPAQTSTHSSFSKSAPNLD----KKQQQQNQQQ----VASLTPPPGLGILGGSGGAGGTPATP 617
             ..|.|.:|.....||..|.:    .::.::|:|.    :|.......:..|||           
 Worm   661 FPPPPQQNTKPKLLKSVLNSNARHASEEFERNEQDDVVPLAEKNVRKAVTRLGG----------- 714

  Fly   618 LLYPGIPIILTRPNNNNI-GNCKAITTTITTTTTTTTNNNNNNNNSISAN-NNNQLNNISTINSN 680
                      |.|....| ....::....:...:|..:|....::|:|.. :|:.|:.:...:|.
 Worm   715 ----------TMPKGQRIDAYLDSMRRVDSWKESTDADNEGAGSSSLSRTVSNDSLDTLPLPDSM 769

  Fly   681 NNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQEYGLDHPLAYQPPPLYLVTDD 745
            |::....:.......:.|:            |..:|:..|:.:.|  |||          :.:|.
 Worm   770 NSSTYVKMHPASGENVFLR------------QIRSKLKKRSETPE--LDH----------IDSDT 810

  Fly   746 SSE-TDTVASPTGCFHFLKSGNSSAASGAVHLHRFGGSLGNSPAVGRKKHSLDSSSHHPPANGSN 809
            :.| |.:..||.|      |.|.|:....:.         |:|... :.||..|....||:..::
 Worm   811 ADETTKSEKSPFG------SLNKSSIKYPIK---------NAPEFS-ENHSRVSPVPVPPSRNAS 859

  Fly   810 SFALPNQLTLPSEDNNTYD-------HAFYRDV------------------IKKMSMASSERVNS 849
            ....|:.....|.|..|.|       ||..|.:                  |:.:.....|..|:
 Worm   860 VSVRPDSKAEDSSDETTKDVGMWGPKHAVTRKIEIVKNDSYPNVEGELKAKIRNLRHVPKEESNT 924

  Fly   850 KSSGDLTMYNSSTPLTARDCDDAEEAFEGGRFQRNFSGSQFPRHCFFTRQEEEGEAEDEDAVAAE 914
            .|..||       ||.|.|             ..|.|....||              ||.|...:
 Worm   925 SSQEDL-------PLDATD-------------NTNDSIIVIPR--------------DEKAKVRQ 955

  Fly   915 VDTADADADDECQVPASQMRQNSTTSRKSSVTFQSVSFEEPDFVATPRTTARSDLYTSSASISFA 979
            :.|.........:..:.|...|||:|        ::|..|  ...:..|::.|.:|.        
 Worm   956 LVTQKVSPLQHHRPFSLQCPNNSTSS--------AISHSE--HADSSETSSLSGVYE-------- 1002

  Fly   980 TYRSASPSLSSSSTTASASPSIASTEAVNGYHMQENSILNTRRMQDV 1026
              ....|.|....:... :..:..|..:|| ..:.|.:..|:.::|:
 Worm  1003 --ERMKPELPRKRSNGD-TKVVPVTWIING-EKEPNGMARTKSLRDI 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 22/135 (16%)
STKc_MLK 134..389 CDD:270963 94/268 (35%)
abl-1NP_509778.2 SH3_Abl 119..185 CDD:212784 15/65 (23%)
SH2_ABL 190..283 CDD:198189 11/92 (12%)
PTKc_Abl 304..566 CDD:270645 98/276 (36%)
FABD 1091..1224 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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