DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and abl-1

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_509778.2 Gene:abl-1 / 181261 WormBaseID:WBGene00000018 Length:1224 Species:Caenorhabditis elegans


Alignment Length:1152 Identity:245/1152 - (21%)
Similarity:402/1152 - (34%) Gaps:366/1152 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IPDLEQVETQVGDGS-LWTALYDYDAQGEDELTLRRGEIVVVL--------------------ST 75
            :.|:..|.:.....: |:.||||:...||::|:||:|:.|.:|                    ::
 Worm   103 VHDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDAS 167

  Fly    76 DSEVSGDVG-----------------WWTGKIG----------------------DKVGVF---- 97
            :....|::|                 |:.|||.                      ..:|.:    
 Worm   168 NQRRLGEIGWVPSNFIAPYNSLDKYTWYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISV 232

  Fly    98 ----------------PKDFVTDE-----------------DPL---------QLNVSSAIGDIQ 120
                            .|.|:|.|                 |.|         :.:....:..:.
 Worm   233 RHDGRVFHYRINVDNTEKMFITQEVKFRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLS 297

  Fly   121 PHEIEYNELDIKEVI-----GSGGFCKVHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLF 180
            |:..:..|||..|:|     |.|.:..|:.||:...:..|.:  :..::|...:.: .|.||.:.
 Worm   298 PNAPDEWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAV--KALKEDAMPLHE-FLAEAAIM 359

  Fly   181 WALKHENIAALRGVCLN-TKLCLVMEYARGGS----LNRILAGKIPPDVLVNWAIQIARGMNYLH 240
            ..|.|:|:..|.|||.: ....::.|:...|:    |.|.....:||.:||..|.|||.||:|| 
 Worm   360 KDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYL- 423

  Fly   241 NEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLKITDFGLAREMYNTQRMSAAGT---YAWMPPE 302
             || ...|||||.:.|.|:.|        ...:||.||||||.|......:.||.   ..|..||
 Worm   424 -EA-RHFIHRDLAARNCLVSE--------HNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPE 478

  Fly   303 VISVSTYSKFSDVWSYGVLLWELIT-GETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMK 366
            .::.:|:|..||||::||||||:.| |..||.|.: ||..||:..|...:..|:.||.:...||.
 Worm   479 GLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVE-LSNVYGLLENGFRMDGPQGCPPSVYRLML 542

  Fly   367 SCWQTDPHKRPGFKEILKQLESIACSKFTLTPQESFHYMQECWRKEIAGVLHDLREKEKRFQTIE 431
            .||...|..||.|::|...||::..|                                       
 Worm   543 QCWNWSPSDRPRFRDIHFNLENLISS--------------------------------------- 568

  Fly   432 EELRNKEEQLLRVQNEQREKANLLKIREQNLRERERVLIERELVMLQPVPSKRKHKKGKKNKPLQ 496
            ..|.::.::.|:..|:::.:::.   |..|:|||.              .||.:|.........:
 Worm   569 NSLNDEVQKQLKKNNDKKLESDK---RRSNVRERS--------------DSKSRHSSHHDRDRDR 616

  Fly   497 ISLPTGFRHTITAVRDKAEQPGSPSFSGLRIVALTDGHKGKTWGPSTMHQRERSLLPSQLSGGQP 561
            .||           ..:...|..|:.|.:|    || .....:.|||     .|.:.|..:.|.|
 Worm   617 ESL-----------HSRNSNPEIPNRSFIR----TD-DSVSFFNPST-----TSKVTSFRAQGPP 660

  Fly   562 -EWPAQTSTHSSFSKSAPNLD----KKQQQQNQQQ----VASLTPPPGLGILGGSGGAGGTPATP 617
             ..|.|.:|.....||..|.:    .::.::|:|.    :|.......:..|||           
 Worm   661 FPPPPQQNTKPKLLKSVLNSNARHASEEFERNEQDDVVPLAEKNVRKAVTRLGG----------- 714

  Fly   618 LLYPGIPIILTRPNNNNI-GNCKAITTTITTTTTTTTNNNNNNNNSISAN-NNNQLNNISTINSN 680
                      |.|....| ....::....:...:|..:|....::|:|.. :|:.|:.:...:|.
 Worm   715 ----------TMPKGQRIDAYLDSMRRVDSWKESTDADNEGAGSSSLSRTVSNDSLDTLPLPDSM 769

  Fly   681 NNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQEYGLDHPLAYQPPPLYLVTDD 745
            |::....:.......:.|:            |..:|:..|:.:.|  |||          :.:|.
 Worm   770 NSSTYVKMHPASGENVFLR------------QIRSKLKKRSETPE--LDH----------IDSDT 810

  Fly   746 SSE-TDTVASPTGCFHFLKSGNSSAASGAVHLHRFGGSLGNSPAVGRKKHSLDSSSHHPPANGSN 809
            :.| |.:..||.|      |.|.|:....:.         |:|... :.||..|....||:..::
 Worm   811 ADETTKSEKSPFG------SLNKSSIKYPIK---------NAPEFS-ENHSRVSPVPVPPSRNAS 859

  Fly   810 SFALPNQLTLPSEDNNTYD-------HAFYRDV------------------IKKMSMASSERVNS 849
            ....|:.....|.|..|.|       ||..|.:                  |:.:.....|..|:
 Worm   860 VSVRPDSKAEDSSDETTKDVGMWGPKHAVTRKIEIVKNDSYPNVEGELKAKIRNLRHVPKEESNT 924

  Fly   850 KSSGDLTMYNSSTPLTARDCDDAEEAFEGGRFQRNFSGSQFPRHCFFTRQEEEGEAEDEDAVAAE 914
            .|..||       ||.|.|             ..|.|....||              ||.|...:
 Worm   925 SSQEDL-------PLDATD-------------NTNDSIIVIPR--------------DEKAKVRQ 955

  Fly   915 VDTADADADDECQVPASQMRQNSTTSRKSSVTFQSVSFEEPDFVATPRTTARSDLYTSSASISFA 979
            :.|.........:..:.|...|||:|        ::|..|  ...:..|::.|.:|.        
 Worm   956 LVTQKVSPLQHHRPFSLQCPNNSTSS--------AISHSE--HADSSETSSLSGVYE-------- 1002

  Fly   980 TYRSASPSLSSSSTTASASPSIASTEAVNGYHMQENSILNTRRMQDV 1026
              ....|.|....:... :..:..|..:|| ..:.|.:..|:.::|:
 Worm  1003 --ERMKPELPRKRSNGD-TKVVPVTWIING-EKEPNGMARTKSLRDI 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 22/135 (16%)
TyrKc 129..386 CDD:197581 95/270 (35%)
STKc_MLK 134..389 CDD:270963 94/268 (35%)
abl-1NP_509778.2 SH3_Abl 119..185 CDD:212784 15/65 (23%)
SH2_ABL 190..283 CDD:198189 11/92 (12%)
PTKc_Abl 304..566 CDD:270645 98/276 (36%)
Pkinase_Tyr 311..562 CDD:285015 92/265 (35%)
FABD 1091..1224 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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