DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and sel-15

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001366799.1 Gene:sel-15 / 175225 WormBaseID:WBGene00016030 Length:847 Species:Caenorhabditis elegans


Alignment Length:388 Identity:111/388 - (28%)
Similarity:167/388 - (43%) Gaps:77/388 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LEQVETQVGDGSLWTALYDYDAQGEDELTLRRGEIVVVLS--TDSEVSGDV-------------- 83
            |:..:|.|    :|.....:||            ||.:|.  ....|.|||              
 Worm   433 LDDQQTPV----IWAYERGHDA------------IVALLKHYAARTVEGDVCSEYSSGESSYTPL 481

  Fly    84 ----GWWTGKIGDKVGVFPKDFVTDEDPLQLNVSSAIGDIQPHEIEYNELDIKEVIGSGGFCKVH 144
                |..|....||.           |.|||.  ||:.  .|..:...|::.:|.||||.|.||:
 Worm   482 PSPMGRLTSLTRDKA-----------DLLQLR--SALP--APFHLCLAEIEFQESIGSGSFGKVY 531

  Fly   145 RGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLN--TKLCLVMEYA 207
            :|.|.|:.||:| .::......:...|.:.:|..:...|.|.|:.|..|..|:  ::..::.|:.
 Worm   532 KGTYRGKLVAVK-RYRAMAFGCKSETDMLCREVSILSRLAHPNVVAFVGTSLDDPSQFAIITEFV 595

  Fly   208 RGGSLNRILAGK---IPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQ 269
            ..|||.|:|..:   :.|...:..::.:||||.|||..|...:|||||.|.|:||       |..
 Worm   596 ENGSLFRLLHEEKRVMDPAFRLRISLDVARGMRYLHESAAKPVIHRDLNSHNILI-------HAD 653

  Fly   270 QKTLKITDFGLAREMYNTQR-----MSAAGTYAWMPPEVISVS-TYSKFSDVWSYGVLLWELITG 328
            .::: :.|||.:|  :..||     ....|...||.|||.|.| .|.:..||:|:.:::||:.|.
 Worm   654 GRSV-VADFGESR--FVCQREDENLTKQPGNLRWMAPEVFSQSGKYDRKVDVFSFALVIWEIHTA 715

  Fly   329 ETPYKGFDPLSVAYGVAV--NTLTLPIPKTC--PETWGALMKSCWQTDPHKRPGFKEILKQLE 387
            |.|:....|.:.|..:..  ...|||...|.  |....:|:...|..:...||.|.||:..||
 Worm   716 ELPFSHLKPAAAAAEMTYKRGRPTLPNQPTAQFPAHILSLIPQAWHPESSSRPDFVEIVALLE 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 14/76 (18%)
TyrKc 129..386 CDD:197581 84/271 (31%)
STKc_MLK 134..389 CDD:270963 85/269 (32%)
sel-15NP_001366799.1 ANKYR 3..217 CDD:223738
ANK repeat 115..147 CDD:293786
PHA03095 128..>388 CDD:222980
ANK repeat 153..180 CDD:293786
ANK repeat 182..213 CDD:293786
ANK repeat 215..246 CDD:293786
ANK repeat 285..318 CDD:293786
ANK repeat 320..353 CDD:293786
ANKYR <323..458 CDD:223738 9/40 (23%)
ANK repeat 355..380 CDD:293786
PKc_TNNI3K 522..780 CDD:270966 85/268 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.