DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and R05H5.4

DIOPT Version :10

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_496201.1 Gene:R05H5.4 / 174581 WormBaseID:WBGene00011039 Length:414 Species:Caenorhabditis elegans


Alignment Length:380 Identity:99/380 - (26%)
Similarity:164/380 - (43%) Gaps:69/380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ALYDYDAQGEDELTLRRGEIVVVLSTDSEVS------------GDVGW------WTGKIGDKV-- 94
            ||.:.||   |:|.:..|:.:|.:....:::            |...:      .|.|||.|.  
 Worm    20 ALMNIDA---DQLLVNEGDFMVTMKKQLDINKLQLFLAVRLKKGIRRYEIKRTSKTAKIGGKTSQ 81

  Fly    95 GVFPKDFVTDEDPLQLNVSSAI-------GDIQPHEIEYNELDIKEVIGSGGFCKVHRG--YYDG 150
            .:.....:...||:::.....:       |..|   :.:.::..::.||:|.:..|:||  ....
 Worm    82 NIVKLINMLKADPIEI
RGEKVVLKRAIPKGKFQ---LMHKDVIFQKKIGAGAYGTVYRGKLVKTD 143

  Fly   151 EEVAIKIAHQTG--EDDMQRMRDNVLQEAKLFWALKHENIAALRGVCL-NTKLCLVMEYARGGSL 212
            |.:|:|.....|  ||.:..|    ::||::.....|.||....|..| :....||:||..||::
 Worm   144 EVIAVKKLDPEGADEDGLAEM----MKEARVMQLYDHPNIVKFHGFILDDLPYLLVLEYCNGGAV 204

  Fly   213 N---RILAGKIPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLK 274
            .   |....||.....|.:....|.||:|||.:   :.||||:.|.|.||::.:         :|
 Worm   205 EDRLRDKGEKIKVPTRVKYTYMAACGMDYLHKK---NCIHRDIASRNCLIHKGV---------VK 257

  Fly   275 ITDFGL--AREMYNTQRMSAAGTYAWMPPEVISVSTYSKFSDVWSYGVLLWELITGETPYKGFDP 337
            :.|||:  |:.:|... :.......|:.|||.........:||:::|:::||..  |||:|  .|
 Worm   258 MADFGMCRAQSVYKVD-LKKPCNIRWLAPEVWDNGETRFNTDVYAFGIMMWEFF--ETPFK--SP 317

  Fly   338 LSVAYGVAVNTLT-----LPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLE 387
            ........|...|     ||.|.:.|.....:|..|||.|..|||..:|:.::||
 Worm   318 YVEMKAAQVKRKTRAGYRLPPPPSMPSRMVEIMSECWQVDAEKRPTAEELKEKLE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 14/73 (19%)
STKc_MLK 134..389 CDD:270963 81/269 (30%)
R05H5.4NP_496201.1 SH2_Fps_family 9..97 CDD:198224 16/79 (20%)
TyrKc 120..363 CDD:197581 77/263 (29%)

Return to query results.
Submit another query.