DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slpr and map3k12

DIOPT Version :9

Sequence 1:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_004912001.1 Gene:map3k12 / 100488307 XenbaseID:XB-GENE-482768 Length:814 Species:Xenopus tropicalis


Alignment Length:901 Identity:244/901 - (27%)
Similarity:367/901 - (40%) Gaps:231/901 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DLEQVETQVGDGSLWTALYDYD--AQGEDELTLRRGEIVVVLSTDSEVSGDVGWWTGKIGDKVGV 96
            |.::.|.:.|.|:....|.|..  |.||..:..:.|               ||:..|..|....|
 Frog    74 DPQKAEDRGGGGAADCPLEDRPCRALGEGRMQCQAG---------------VGFLGGLFGCLRPV 123

  Fly    97 FP---KDFVTD----EDPLQLNVSSAIGDIQPHEIEYNELDIKEVIGSGGFCKVHRGYYDGEEVA 154
            :.   |.:.|:    ||              |.|:.:.|:...:.:|||....|..|.:.|:|||
 Frog   124 WAMIGKTYSTEHKQGED--------------PWEVPFEEIQDLQWVGSGAQGAVFLGKFHGDEVA 174

  Fly   155 IKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLNTK-LCLVMEYARGGSLNRIL-A 217
            :|......|.|::.:|           .|||.||...:|||.... .|::||:...|.|..:| |
 Frog   175 VKKVRDIKETDIKHLR-----------KLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLRA 228

  Fly   218 G-KIPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLI-YEAIEGNHLQQKTLKITDFGL 280
            | ||.|.:||:|::.||.||||||..   .||||||||.|:|| |:.:         :||:|||.
 Frog   229 GRKITPSLLVDWSMGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDL---------VKISDFGT 281

  Fly   281 AREMYN-TQRMSAAGTYAWMPPEVISVSTYSKFSDVWSYGVLLWELITGETPYKGFDPLSVAYGV 344
            ::|:.: :.:||.|||.|||.||||.....|:..|:||:||:||||:|||.|||..|..::.:||
 Frog   282 SKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGV 346

  Fly   345 AVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLESIACSKFTLTPQESFHYMQECW 409
            ..|:|.||:|.:||:.:..|::.||.:.|..||.|::||..|: ||.:....||||::...|..|
 Frog   347 GSNSLHLPVPSSCPDGFKLLLRQCWDSKPRNRPSFRQILCHLD-IASADVLSTPQETYFKSQVEW 410

  Fly   410 RKEIAGVLHDLREKEKRFQTIEEELRNKEEQLLRVQNEQRE-------KANL-----------LK 456
            |.|:......::.:....|.:||||..:..:.||...:.||       :||.           |:
 Frog   411 RDEVRLHFEKIKSEGTCLQRLEEELITRRREELRHALDIREHYERKLQRANTLYVELNSLMLQLE 475

  Fly   457 IREQNLRERERVLIERELVML--QPVPSKRKHKKGKK-NKPLQISLPTGFRHTITAVR------D 512
            ::|:.|..||::|.::...:|  ||.||....|..|| |.|.::| |.|.|..|....      |
 Frog   476 LKEKELLRREQILEKKYPAILRQQPRPSSTVEKLIKKRNVPQKLS-PHGKRPDILKSEVLLPKVD 539

  Fly   513 KAEQPGSPSFSGLRIVALTDGHKGKTWGP-----STMHQRERSLLPSQLSGGQPEWPAQTSTHSS 572
            ....|.:|  :|.:.:..:.| :|:...|     ..|.....::.|......||  ||: ..| .
 Frog   540 SVLSPSTP--TGCQKLPPSPG-RGRRGKPRYRKAKDMVNLRAAVTPEPTPQSQP--PAR-DPH-P 597

  Fly   573 FSKSAPNL---------DKKQQQQNQQQVASLTPPPG----LGILGGSGGA-GGTPATPLLYPGI 623
            .|.|:|:|         .:..|......|.||..||.    .|...||..| ||...||      
 Frog   598 LSSSSPDLLCTPLEAEARRGSQSAESSPVRSLPGPPSPDSPSGRAAGSRAARGGQHLTP------ 656

  Fly   624 PIILTRPNNNNIGNCKAITTTITTTTTTTTNNNNNNNNSISANNNNQLNNISTINSNNNNNQTNL 688
                         :.:.....:|                     .:|...:|     :...:..:
 Frog   657 -------------SARLYRAAVT---------------------RSQKRGLS-----SEEEEGEV 682

  Fly   689 TSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQEYGLDHPLAYQPPPLYLVTDDSSETDTVA 753
            .|:      |:..|..|...|.........:::.|.|...|........|.:.||.|...|:|..
 Frog   683 DSE------LEMERRQSGGVTCRWPTGMSQNQSPSSENLSDGEEGNTTDPSHSVTPDVLSTNTDE 741

  Fly   754 SPTGCFHFLKSGNSSAASGAVHLHRFGGSLGNSPAVGRKKHSLDSSSHHPPANGSNSFALPNQLT 818
            .|..                                  :...|.|.|..||.:           .
 Frog   742 RPDD----------------------------------RSEDLVSQSSEPPLD-----------L 761

  Fly   819 LPSEDNNTYDHAFYRDVIKKMSMASSERVNSKSSGD-LTMYNSSTPLTARDCDDAE 873
            |...|..:...|    ||:|:....|   |.:::|: :.:|:.|      |||.||
 Frog   762 LTQSDGLSEKEA----VIQKVKTQLS---NEQTAGENVVLYDDS------DCDSAE 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 12/61 (20%)
TyrKc 129..386 CDD:197581 108/261 (41%)
STKc_MLK 134..389 CDD:270963 109/259 (42%)
map3k12XP_004912001.1 STKc_MAP3K12_13 155..391 CDD:270961 109/259 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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