DRSC/TRiP Functional Genomics Resources

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Protein Alignment Optix and KNAT6

DIOPT Version :9

Sequence 1:NP_001260793.1 Gene:Optix / 44108 FlyBaseID:FBgn0025360 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_173752.3 Gene:KNAT6 / 838946 AraportID:AT1G23380 Length:329 Species:Arabidopsis thaliana


Alignment Length:224 Identity:59/224 - (26%)
Similarity:90/224 - (40%) Gaps:39/224 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPTHHQIIAPSPIL-AVPTL-AFSAAQVEIVCKTLEDSGDIERLAR-------FLWSLPVALPNM 72
            |..:.|.:.||... |.|.| .|.....:|:.|...|      |||       ||..:.:.|.|:
plant   127 SDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSD------LARPFDEATCFLNKIEMQLRNL 185

  Fly    73 HEILNCEAVLRARAVVAYHV-GNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLG 136
                 |..|..||.|....| .:..||..  .:|:..:....:.:...|:...:.....|..:| 
plant   186 -----CTGVESARGVSEDGVISSDEELSG--GDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTL- 242

  Fly   137 PVDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTK--KRELAKATGLNPTQ 199
            .::..:.:||..||             :|..::||..|.|...:|.||:  |..||.||||:..|
plant   243 KLEFSKKKKKGKLP-------------REARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQ 294

  Fly   200 VGNWFKNRRQRDRAAAAKNRIQHSQNSSG 228
            :.|||.|:|:|....:.........:|||
plant   295 INNWFINQRKRHWKPSENMPFAMMDDSSG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OptixNP_001260793.1 SIX1_SD 37..150 CDD:293483 25/120 (21%)
homeodomain 158..206 CDD:238039 19/49 (39%)
KNAT6NP_173752.3 KNOX1 85..125 CDD:397730
KNOX2 139..186 CDD:397731 14/57 (25%)
ELK 226..247 CDD:397729 3/21 (14%)
Homeobox_KN 266..305 CDD:399131 18/38 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 78 1.000 Inparanoid score I2393
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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