DRSC/TRiP Functional Genomics Resources

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Protein Alignment Optix and AT4G12750

DIOPT Version :9

Sequence 1:NP_001260793.1 Gene:Optix / 44108 FlyBaseID:FBgn0025360 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001319916.1 Gene:AT4G12750 / 826887 AraportID:AT4G12750 Length:1117 Species:Arabidopsis thaliana


Alignment Length:74 Identity:23/74 - (31%)
Similarity:31/74 - (41%) Gaps:17/74 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 LREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQRDRAAAAKNRIQHSQNSSGMGCRSRR 235
            |..:||:..||.|.:..:|.|:.||...:|..|||.||.|                 |.|.:|..
plant    12 LEGFYLEQMYPTPKEMEDLGKSLGLTLKEVRGWFKRRRSR-----------------GKGVKSMA 59

  Fly   236 ADGAASPTP 244
            .||..:..|
plant    60 NDGLGAKNP 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OptixNP_001260793.1 SIX1_SD 37..150 CDD:293483
homeodomain 158..206 CDD:238039 13/34 (38%)
AT4G12750NP_001319916.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 48 1.000 Domainoid score I4491
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10390
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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