DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Optix and KNAT1

DIOPT Version :9

Sequence 1:NP_001260793.1 Gene:Optix / 44108 FlyBaseID:FBgn0025360 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_192555.1 Gene:KNAT1 / 826364 AraportID:AT4G08150 Length:398 Species:Arabidopsis thaliana


Alignment Length:140 Identity:39/140 - (27%)
Similarity:60/140 - (42%) Gaps:44/140 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKKFPLPPTIWDGEQKT 160
            |||    :||...|.| |.|.::..|..                  :.:||..||          
plant   278 REL----KNHLLKKYS-GYLSSLKQELS------------------KKKKKGKLP---------- 309

  Fly   161 HCFKERTRSLLREWYL--QDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQR------DRAAAAK 217
               ||..:.||..|.|  :.|||:.::|..||::|||:..|:.|||.|:|:|      |......
plant   310 ---KEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVM 371

  Fly   218 NRIQHSQNSS 227
            :.:||..:::
plant   372 DGLQHPHHAA 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OptixNP_001260793.1 SIX1_SD 37..150 CDD:293483 12/53 (23%)
homeodomain 158..206 CDD:238039 19/49 (39%)
KNAT1NP_192555.1 KNOX1 133..172 CDD:281744
KNOX2 189..234 CDD:281745
ELK 279..300 CDD:281743 9/25 (36%)
Homeobox_KN 319..358 CDD:283551 17/38 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 78 1.000 Inparanoid score I2393
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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