Protein Alignment Optix and ceh-88

DIOPT Version :10

• Sequence 1: NP_001260793.1
• Gene: Optix / 44108
• FlyBaseID: FBgn0025360
• Length: 492
• Species: Drosophila melanogaster
• Sequence 2: NP_503081.2
• Gene: ceh-88 / 178514
• WormBaseID: WBGene00008195
• Length: 262
• Species: Caenorhabditis elegans
• Alignment Length: 189
• Identity: 47/189 - (24%)
• Similarity: 72/189 - (38%)
• Gaps: 58/189 - (30%)

  Fly    70 PNMHEI-------------LNCEAVLRARAVVA--YHVGNF------RELYAIIE-NHKFTKASY 112
            ||.|..             .:|:   .|..|:.  |..|||      .||..:.| :||..:.:.
 Worm     3 PNFHNTGPSGSAPRKPETWRSCK---EANKVIEMFYSEGNFYHDIYMEELANLAETSHKNVRDTL 64

  Fly   113 GKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQ 177
            .:|:..                    |: |..|..|.||      ::.:.|....|..|.:.:|.
 Worm    65 SRLRKK--------------------DE-RAGKYVPPPP------KQMYEFTSEQRGALDQAFLV 102

  Fly   178 DPYPNPTKKRELAKATGLNPTQVGNWFKN-RRQRDRAAAAKN-----RIQHSQNSSGMG 230
            .|..:....|||::.|||...|:.|||.| ||:.|..:|.|:     ||:.....:|:|
 Worm   103 TPQMDSDGARELSEITGLTVKQINNWFCNQRRKADGRSAEKDKKRRERIREDMKKNGLG 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Optix	NP_001260793.1	SIX1_SD	37..150	CDD:465293	20/101 (20%)
		homeodomain	158..206	CDD:238039	15/47 (32%)
ceh-88	NP_503081.2	HOX	81..135	CDD:197696	19/59 (32%)