DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patj and PDZD7

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001182192.1 Gene:PDZD7 / 79955 HGNCID:26257 Length:1033 Species:Homo sapiens


Alignment Length:1025 Identity:213/1025 - (20%)
Similarity:324/1025 - (31%) Gaps:399/1025 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 IQAIELVNDGTG-LGFGIIGA--RNSGVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSE 208
            |.::.:.....| |||.:.|.  ...|:.|..:..|..|::.| |..||.|.::..::|......
Human    84 IHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMG 147

  Fly   209 QVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEPGT--AVVPTRVLVDPAELERYLISTGYPEIF 271
            ....|| .|.:.:.::|.|  ...||..:::.|..|  .||..|::|:                 
Human   148 SAVKVL-TSSSRLHMMVRR--MGRVPGIKFSKEKTTWVDVVNRRLVVE----------------- 192

  Fly   272 GESSTASTPQTTTEDD---RFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIA 333
               ...|||..|:.:|   |.|:...||                           |...||..|.
Human   193 ---KCGSTPSDTSSEDGVRRIVHLYTTS---------------------------DDFCLGFNIR 227

  Fly   334 GYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQV-VNL 397
            |   .||...||:|..|..|..|:.:| |:|.|:::..:|......|:.||||:||  ||. :.|
Human   228 G---GKEFGLGIYVSKVDHGGLAEENG-IKVGDQVLAANGVRFDDISHSQAVEVLK--GQTHIML 286

  Fly   398 RLERYLRGPKFEQ---------------LQQAIAAND-----------------KLPS------- 423
            .::...|.|.:::               |||...|::                 .|||       
Human   287 TIKETGRYPAYKEMVSEYCWLDRLSNGVLQQLSPASESSSSVSSCASSAPYSSGSLPSDRMDICL 351

  Fly   424 --SAPGTPSRAP--------MPTP------VATTSSATTT--------------PSRSITRELEE 458
              ..||  ||.|        |.|.      |.|..|...|              |.|.:...|.|
Human   352 GQEEPG--SRGPGWGRADTAMQTEPDAGGRVETWCSVRPTVILRDTAIRSDGPHPGRRLDSALSE 414

  Fly   459 E-------ALPAPEAFMTTPPSVTTM----------------------TTTTLSS--FGAGKQLV 492
            .       ||..|...:|...|..|:                      .:.||.:  |..|:|..
Human   415 SPKTALLLALSRPRPPITRSQSYLTLWEEKQQRKKEKSGSPGEKGALQRSKTLMNLFFKGGRQGR 479

  Fly   493 AVRD------SLDGST--------------------KII---------------------PTEVV 510
            ..||      :||..:                    |.:                     |:..:
Human   480 LARDGRREAWTLDSGSLAKTYPRLDIEKAGGVGPVQKFVTWRLRRDQERGRALLSARSGSPSSQL 544

  Fly   511 PLAD-KTEAKNSG------------------VITRH--KYYTDPELSDDAETEIIRKWQKIVGSD 554
            |..| :.:|..|.                  .:|||  :|..:..:.|     ::|....|:...
Human   545 PNVDEQVQAWESRRPLIQDLAQRLLTDDEVLAVTRHCSRYVHEGGIED-----LVRPLLAILDRP 604

  Fly   555 VEVIVAQIKKFAVG----GLGISLEGTVDVEG-----GREVRP-------------HHYIRSILP 597
            .::::.|..:..|.    |...|:...|::|.     .|.|||             .|.|..: |
Human   605 EKLLLLQDIRSVVAPTDLGRFDSMVMLVELEAFEALKSRAVRPPALRPARQDTPPKRHLITPV-P 668

  Fly   598 DGPVGVNGVLRSGDELLEVNG-----------ERLLGMNHLEV-------------VAILKELPL 638
            |.        |.|..||.|||           |||   ..|:|             :..|:::|:
Human   669 DS--------RGGFYLLPVNGFPEEEDNGELRERL---GALKVSPSASAPRHPHKGIPPLQDVPV 722

  Fly   639 D----VRMVC-----------------------------------------GRNRNSSLLPFSDD 658
            |    :|:.|                                         .|:|:.|....|..
Human   723 DAFTPLRIACTPPPQLPPVAPRPLRPNWLLTEPLSREHPPQSQIRGRAQSRSRSRSRSRSRSSRG 787

  Fly   659 TLKKLSNNFENLLP------ATDRLVKAKS---------DGSLATAGS-VADGDSVAAAAASFSK 707
            ..|.......:.:|      ...|..|.:.         ||..|..|: ....:|.....|..:.
Human   788 QGKSPGRRSPSPVPTPAPSMTNGRYHKPRKARPPLPRPLDGEAAKVGAKQGPSESGTEGTAKEAA 852

  Fly   708 LKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSIL-DYQDPLDPNDTLIVIRSLVPGGVAQLDG 771
            :|:.|.|..|           :.|.|..:.||.||. ..:..:.|   ::.|..:.|||.|.|.|
Human   853 MKNPSGELKT-----------VTLSKMKQSLGISISGGIESKVQP---MVKIEKIFPGGAAFLSG 903

  Fly   772 RLIPGDRLLFVNSINLENASLDQAVQALKGASKG--------VVRIGVAKPLP-------MTDNS 821
            .|..|..|:.|:..|||..:..:||..::.|.:.        |||:....|.|       :||..
Human   904 ALQAGFELVAVDGENLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPSPRPSPSDSSALTDGG 968

  Fly   822 LKACSNASTTSEETLDAQPSP----PALPTVAPPAMPPSASMGAEPDLIP 867
            |.|   ....:.:.|||.|.|    |..||  .|..||:.:...:|...|
Human   969 LPA---DHLPAHQPLDAAPVPAHWLPEPPT--NPQTPPTDARLLQPTPSP 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 18/74 (24%)
PDZ_signaling 318..400 CDD:238492 28/82 (34%)
PDZ_signaling 557..643 CDD:238492 30/135 (22%)
PDZ_signaling 726..807 CDD:238492 24/89 (27%)
PDZD7NP_001182192.1 PDZ_signaling 84..164 CDD:238492 19/81 (23%)
PDZ_signaling 209..289 CDD:238492 32/112 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..380 10/58 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..464 0/19 (0%)
HN_PDZD7_like 554..630 CDD:259824 12/80 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..864 18/120 (15%)
PDZ_signaling 860..948 CDD:238492 26/101 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 943..1033 22/76 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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