DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and Slc9a3r1

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_067605.1 Gene:Slc9a3r1 / 59114 RGDID:708538 Length:356 Species:Rattus norvegicus


Alignment Length:377 Identity:88/377 - (23%)
Similarity:141/377 - (37%) Gaps:85/377 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 GLGFGIIGARNS-GVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHV 221
            |.||.:.|.:.. |..::.:.||..|:|.| |.:||.::::...|:.:...:||.:.:|.:...|
  Rat    23 GYGFHLHGEKGKVGQFIRLVEPGSPAEKSG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 86

  Fly   222 RLVVARPVEQSVPTPQYALEPGTAVVPTRVLVDPAELERYLISTGYPEIFGESSTASTPQTTTED 286
            ||:|                           ||| |.:..|...|.| |..|...|......||.
  Rat    87 RLLV---------------------------VDP-ETDEQLKKLGVP-IREELLRAQEKSEHTEP 122

  Fly   287 DRFVYRGETSMLIDPNIDLEELLALPETEKLQVE----------LKKDANGLGITIAGYVCEKEE 341
            ..   ..:|....|.|          |.||..:|          :||..||.|..:..   :|.:
  Rat   123 PA---AADTKKAGDQN----------EAEKSHLERCELRPRLCTMKKGPNGYGFNLHS---DKSK 171

  Fly   342 LSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRL------- 399
             .|.|:::|.|.|.|:.|| :|..|||:||:|..::|..:...|..:|..|....|.:       
  Rat   172 -PGQFIRAVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIKAGGDEAKLLVVDKETDE 234

  Fly   400 ----------ERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITR 454
                      :.:|.||..|.........:....:.....|.:|.|....:.||.|:.       
  Rat   235 FFKKCRVTPSQEHLDGPLPEPFSNGEIQKENSREALVEPASESPRPALARSASSDTSE------- 292

  Fly   455 ELEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKIIP 506
              |..|..:|:...:|.||.|:.::..:..|.....:...|.....|:|..|
  Rat   293 --ELNAQDSPKRHDSTEPSSTSSSSDPILDFNISLAVAKERAHQKRSSKRAP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 20/68 (29%)
PDZ_signaling 318..400 CDD:238492 27/108 (25%)
PDZ_signaling 557..643 CDD:238492
PDZ_signaling 726..807 CDD:238492
Slc9a3r1NP_067605.1 PDZ_signaling 12..91 CDD:238492 21/95 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..142 9/41 (22%)
PDZ_signaling 149..228 CDD:238492 26/83 (31%)
EBP50_C 232..356 CDD:286142 22/120 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..356 18/87 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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