DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and si:dkey-92j12.5

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:XP_021332028.1 Gene:si:dkey-92j12.5 / 560912 ZFINID:ZDB-GENE-090313-354 Length:1860 Species:Danio rerio


Alignment Length:994 Identity:293/994 - (29%)
Similarity:398/994 - (40%) Gaps:351/994 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DISSALQQIEAVKKGIDESDDPKLQMQTAESLSTILGILQDPVFRTIVHVQDSLSELNAQ----- 65
            |...||..:|.:::.:.:    :.::...|.||.:..:||.|:|..|:.:|::..:...|     
Zfish     3 DTQRALVAVERLQERLRK----RGELPAEEKLSLLKSVLQSPLFHQILIMQETGQQRKQQQVSPR 63

  Fly    66 -LAQHPSMLPNDFDI----------------------------------------DVAGNLVLSL 89
             .:..|..:.:|.|:                                        |:  :::.|:
Zfish    64 TSSAPPQSMCDDRDVLNSSQPSCTLRYRDSYLSAQRRSERSRTASHVTFAHYITEDI--SVLQSM 126

  Fly    90 NGGEVMYDFDEQRSSSHSHSAPG------SPDKSGG----------------------------- 119
            ..|..:..||.::    ..||.|      :.:.:||                             
Zfish   127 AKGHTVLSFDLEK----GESALGVSIVNLAIESTGGHGIFIKEIQTDSVAYSDGRLHEGDQILAV 187

  Fly   120 ----------------------------VGEEPRPQSQNSKGAGVADLYATDYAQIQAIELVNDG 156
                                        :..||.|.....|.           .||..:||.|||
Zfish   188 NDKVFDSSVTHDQAVQILQEAASVVTLTIAREPTPSFSTPKP-----------RQIYHVELENDG 241

  Fly   157 TGLGFGIIGARNSGVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHV 221
            :||||||||.|::|.:||||:|.|||.|||||||||.:|.||||::.||.||:||..||.:||||
Zfish   242 SGLGFGIIGGRSTGTMVKTIIPDGVAGKDGRLRSGDLLLSIGDVDVSEMGSEEVAHELRVAGTHV 306

  Fly   222 RLVVARPVEQSVPTPQYALEPGTAVVPTRVLVDPAELERYLISTGYPEIFGESSTASTPQTTTED 286
            ||::||.:..|.|.|..||:..|                                 ...|.|.|.
Zfish   307 RLIIAREITDSDPLPASALQQDT---------------------------------QKKQDTVEQ 338

  Fly   287 DRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIAGYVCEKEELSGIFVKSVS 351
                                             :.||                            
Zfish   339 ---------------------------------KWKK---------------------------- 342

  Fly   352 PGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIA 416
             |:..|..|.|.:...||.|||:.....|.....|:|..:||.|.|.|                 
Zfish   343 -GNTVDKDGHIGIGGHIISVDGKIQHDCSKRNPEEILLITGQQVELHL----------------- 389

  Fly   417 ANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSIT-RELEEEALP--APEAFMTTPPSVTTMT 478
                        |.:. .|....||.|.:|...|.:| ..|....||  .||.....||.....|
Zfish   390 ------------PKKC-SPCETQTTPSTSTNFQRPLTPLGLLPPPLPPRLPEQKPVLPPGKVFYT 441

  Fly   479 TTTLSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEI 543
            ...  .|...|:  ..|.|          :...|..|||::|      || .:..:||||.|..:
Zfish   442 ERL--DFNFNKE--CFRSS----------QTCCLLSKTESRN------HK-SSCCKLSDDEEKSL 485

  Fly   544 IRKWQKIVGSDVEVIVAQIKKF-AVGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVL 607
            ..|||..:|...||:|.|::|| ...|||:|||..   ||      ||||.||||:||:|..|::
Zfish   486 KEKWQSKLGPQYEVLVTQVEKFIESSGLGVSLEAK---EG------HHYICSILPEGPLGQTGII 541

  Fly   608 RSGDELLEVNGERLLGMNHLEVVAILKELPLDVRMVCGRNRNSSLLP------FSDD---TLKKL 663
            ..||||:||||..|:|..|.|||::|||||::|.:||.|     |:|      ..||   |||:|
Zfish   542 HPGDELIEVNGFSLIGETHKEVVSLLKELPMNVCVVCSR-----LIPPRVSEEEDDDVQLTLKEL 601

  Fly   664 SNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAASFSKLKSRSLEPLTGLAMWSSQPQI 728
            ...|..         ||:.:    ..|||        .|.....|||.: ..|:..|||.::.::
Zfish   602 LAEFNE---------KAEQN----IFGSV--------FALREEDLKSEA-PVLSHQAMWENEIEV 644

  Fly   729 IELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLDGRLIPGDRLLFVNSINLENASLD 793
            .||.|||.||||||||||||::|..|:||||||||||:|..||||:|||||:|||..:|.:|||.
Zfish   645 YELQKGDSGLGFSILDYQDPVNPGRTVIVIRSLVPGGLADRDGRLLPGDRLMFVNQTDLSHASLA 709

  Fly   794 QAVQALKGASKGVVRIGVAKPLP----------MTDNSLKACSNASTTSEETLDAQPSPPALPTV 848
            |||..||..:.|.|||||.||||          :|.|.....::..:|.:....:|.|       
Zfish   710 QAVHVLKSTALGTVRIGVTKPLPENDIQDTGAEITGNCHSEHNHQHSTFQTNSHSQKS------- 767

  Fly   849 APPAMPPSASMGAEPDLIP 867
                     .|.|||..||
Zfish   768 ---------KMEAEPVSIP 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425 11/63 (17%)
PDZ_signaling 154..226 CDD:238492 49/71 (69%)
PDZ_signaling 318..400 CDD:238492 18/81 (22%)
PDZ_signaling 557..643 CDD:238492 45/86 (52%)
PDZ_signaling 726..807 CDD:238492 52/80 (65%)
si:dkey-92j12.5XP_021332028.1 L27_2 3..58 CDD:312549 13/58 (22%)
PDZ 137..220 CDD:214570 5/86 (6%)
PDZ 231..312 CDD:214570 53/80 (66%)
PDZ_signaling 509..577 CDD:238492 40/76 (53%)
PDZ_signaling 646..727 CDD:238492 55/80 (69%)
PDZ 782..852 CDD:214570
PDZ_signaling 993..1084 CDD:238492
PDZ_signaling 1210..1286 CDD:238492
MPDZ_u10 1367..1424 CDD:318804
PDZ_signaling 1427..1506 CDD:238492
PDZ_signaling 1531..1612 CDD:238492
PDZ_signaling 1649..1729 CDD:238492
PDZ_signaling 1771..1853 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6833
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003499
OrthoInspector 1 1.000 - - otm26421
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - LDO PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1763
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.910

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