DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and tamalin

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001035013.1 Gene:tamalin / 558950 ZFINID:ZDB-GENE-060312-30 Length:382 Species:Danio rerio


Alignment Length:240 Identity:54/240 - (22%)
Similarity:86/240 - (35%) Gaps:76/240 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 PETEKLQVEL-KKDANGLGITIAGYVCEKEELSGI----FVKSVSPGSAADLSGRIRVNDRIIEV 371
            ||.::..|.| ||:....|..|..|....:..:.:    ||..|...|.|.|:| ::|.|.|..|
Zfish    85 PEPQRKTVILEKKEEESFGFEIQTYGLHHQSENSVEMCTFVCKVHEDSPALLAG-LKVGDTIASV 148

  Fly   372 DGQSLQGYSNHQAVELLKKSGQVVNLRLE----------------RYLRGPKFEQ---------- 410
            :..|:.|:.:.:.|:|:|.||.  |:|||                :||:....|:          
Zfish   149 NDTSVDGFRHKEIVQLIKSSGN--NIRLETVYSDSIRKAELEARLQYLKQTLHEKWDEYRSLMVQ 211

  Fly   411 --------LQQAIAANDKLPSSAPGTPSRAPMPTPVAT-----TSSATTTPSRSITRELEEEAL- 461
                    :...:|..:.|.|:  |.......|:|.|.     |.|.:::.|.......|::.| 
Zfish   212 EQRLVHGIVMSDVAMYESLESA--GVYGSLGAPSPAALRALRGTDSTSSSVSHLSAATAEDDPLY 274

  Fly   462 --------------------------PAPEAFMTTPPSVTTMTTT 480
                                      ||.|.|.|...|:|...:|
Zfish   275 QTCIFNNTSNDQIHAKQENTRPRLIRPASELFTTAKTSLTRSAST 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492
PDZ_signaling 318..400 CDD:238492 27/86 (31%)
PDZ_signaling 557..643 CDD:238492
PDZ_signaling 726..807 CDD:238492
tamalinNP_001035013.1 PDZ_signaling 90..175 CDD:238492 27/87 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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