DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patj and inaD

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster


Alignment Length:607 Identity:126/607 - (20%)
Similarity:232/607 - (38%) Gaps:138/607 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 EIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIA 333
            :..|:..||..         |:..|    :.:|..:|..::.|.:|.|         ...||.|.
  Fly     3 QFLGKQGTAGV---------FISFG----MHNPFPELIHMVTLDKTGK---------KSFGICIV 45

  Fly   334 -GYVCE--KEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVV 395
             |.|.:  ..:.:|||:|.:.|.|.|.|.||::|.|||:.::|:.::..:....::|:|::...:
  Fly    46 RGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKI 110

  Fly   396 NLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEA 460
            .|.::      .|::..:..|.:|  |.|.....::........|.::|:......     :.:.
  Fly   111 ELEIQ------TFDKSDEQQAKSD--PRSNGYMQAKNKFNQEQTTNNNASGGQGMG-----QGQG 162

  Fly   461 LPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLD--GSTKIIPTEVVPLADKTEAKNSGV 523
            .....|.|....|:....||..:|........|..|..|  ..|..|.||.....|:..|.|. .
  Fly   163 QGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAGNC-K 226

  Fly   524 ITRHKYYTDPELSDD---AETEIIRKWQKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVEGGRE 585
            :.:.:...|.|..|:   ...:|.:::..:  .|:..|  ::::.|...||::|.|..|.:    
  Fly   227 LNKQEKDRDKEQEDEFGYTMAKINKRYNMM--KDLRRI--EVQRDASKPLGLALAGHKDRQ---- 283

  Fly   586 VRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAILKELPLD-VRMVCGRNRN 649
             :...::..:.|:|.:| :..::.|||::||||..|....||...|:.|.:..| :.|:..|.:.
  Fly   284 -KMACFVAGVDPNGALG-SVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKP 346

  Fly   650 S---------SLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAASF 705
            :         ...|.:.|..|.:.:.|...     |.|:.:.:|.|..                 
  Fly   347 NDEGMCVKPIKKFPTASDETKFIFDQFPKA-----RTVQVRKEGFLGI----------------- 389

  Fly   706 SKLKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLD 770
                         :.::....::        |.|..|.|.::                |..|:|.
  Fly   390 -------------MVIYGKHAEV--------GSGIFISDLRE----------------GSNAELA 417

  Fly   771 GRLIPGDRLLFVN-SINLENASLDQAVQALKGASKGVVRIGVAKPLPMT---DNSLKACSNASTT 831
            |..: ||.||.|| .:.|| ::.|.|...||.|.      ||...:.:|   :.::||...|...
  Fly   418 GVKV-GDMLLAVNQDVTLE-SNYDDATGLLKRAE------GVVTMILLTLKSEEAIKAEKAAEEK 474

  Fly   832 SEETL---DAQPSPPALPTVAP 850
            .:|..   :.:|..||...:.|
  Fly   475 KKEEAKKEEEKPQEPATAEIKP 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492
PDZ_signaling 318..400 CDD:238492 23/84 (27%)
PDZ_signaling 557..643 CDD:238492 23/86 (27%)
PDZ_signaling 726..807 CDD:238492 21/81 (26%)
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 26/96 (27%)
PDZ_signaling 259..340 CDD:238492 23/88 (26%)
PDZ_signaling 377..457 CDD:238492 27/141 (19%)
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4314
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - P PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.760

Return to query results.
Submit another query.