DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patj and IL16

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001339615.1 Gene:IL16 / 3603 HGNCID:5980 Length:1382 Species:Homo sapiens


Alignment Length:1141 Identity:215/1141 - (18%)
Similarity:359/1141 - (31%) Gaps:450/1141 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 QRSSSHSHSAPGSPDKSGGVGEEPRPQS-----QNSKGAGVADLYATDYAQIQAIELVNDGTGLG 160
            ::|.|.....|..  |:.|.....|..|     |.|.|     |.|:..:.|  :.:.....|||
Human   224 RKSLSQQLDCPAG--KAAGTSRPTRSLSTAQLVQPSGG-----LQASVISNI--VLMKGQAKGLG 279

  Fly   161 FGIIGARNS-----GVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTH 220
            |.|:|.::|     |:.||||..||.|..||||:.||.||::...::..:..:......:|:   
Human   280 FSIVGGKDSIYGPIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQA--- 341

  Fly   221 VRLVVARPVEQSVPTPQYALEPG--TAVVPTRVLVDPAELERYLISTGYPEIFGESSTASTPQTT 283
                                :.|  |..|.||:...|:     |.|...|.:.  .|.:|:...|
Human   342 --------------------KKGLLTLTVRTRLTAPPS-----LCSHLSPPLC--RSLSSSTCIT 379

  Fly   284 TEDDRFVYRGETSML--IDPNIDLEELLALPETEKLQVELKKDAN-GLGI---TIAGYVCEKEEL 342
            .:...|.....::.:  ..||..:          .::|.|:|:|. ||||   ::..:.|    :
Human   380 KDSSSFALESPSAPISTAKPNYRI----------MVEVSLQKEAGVGLGIGLCSVPYFQC----I 430

  Fly   343 SGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSL------QGY---------------SNH---- 382
            |||||.::||||.|.|.||:|..|.|:|:....:      :.|               |.|    
Human   431 SGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNEVYTILSHCDPGPVPIIVSRHPDPQ 495

  Fly   383 -----------QAVELLK--KSGQVVNL----RLERYLRG-------------PKFEQLQQAI-- 415
                       ||||..|  |.....:|    |||....|             |...:.|:.:  
Human   496 VSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPHRRAQKVMIR 560

  Fly   416 -AANDKLPSSAP-GTPSRAPMPTPVATTSSATTTPSRSITRE----------LEEEALPAPEAFM 468
             :::....|.:| |:|.......|.:....:|.:||..:.||          |.:|:.|.||:..
Human   561 SSSDSSYMSGSPGGSPGSGSAEKPSSDVDISTHSPSLPLAREPVVLSIASSRLPQESPPLPESRD 625

  Fly   469 TTPP-----SVTTMTTTTLSS---------FGAG----KQLVAVRDSLDGSTKIIPT------EV 509
            :.||     |...:....:||         |.:.    |.|....:|...|....||      |:
Human   626 SHPPLRLKKSFEILVRKPMSSKPKPPPRKYFKSDSDPQKSLEERENSSCSSGHTPPTCGQEAREL 690

  Fly   510 VPL-------ADKTEAKNSGV------------------------IT--------------RHKY 529
            :||       |.::.:.::|.                        :|              |..|
Human   691 LPLLLPQEDTAGRSPSASAGCPGPGIGPQTKSSTEGEPGWRRASPVTQTSPIKHPLLKRQARMDY 755

  Fly   530 YTD------------------------------------------------------------PE 534
            ..|                                                            |:
Human   756 SFDTTAEDPWVRISDCIKNLFSPIMSENHGHMPLQPNASLNEEEGTQGHPDGTPPKLDTANGTPK 820

  Fly   535 LSDDAETEIIRK---------W-------------------------------QKIVGSDVEV-- 557
            :...|::..::|         |                               ::.:||.:..  
Human   821 VYKSADSSTVKKGPPVAPKPAWFRQSLKGLRNRASDPRGLPDPALSTQPAPASREHLGSHIRASS 885

  Fly   558 ----IVAQIKKFAVGG------------------------LGISLEGTVDVEGGREV-------R 587
                |..:|..|...|                        ||...||......||..       :
Human   886 SSSSIRQRISSFETFGSSQLPDKGAQRLSLQPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQ 950

  Fly   588 PHHYIRS--------------------------ILPDGPVGVNGVLRSGDE-------------- 612
            |...:.|                          .||.||..:..:|.:..|              
Human   951 PEQVLSSGSPAASEARDPGVSESPPPGRQPNQKTLPPGPDPLLRLLSTQAEESQGPVLKMPSQRA 1015

  Fly   613 --------------LLEVNGERLLGMNHLEVVAILKE---LPLDV---RMVCGRNRNSSLLPFSD 657
                          ||:....:|..::.....|::|.   ||..:   :..|.....:|  |.|.
Human  1016 RSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEGAS--PTSS 1078

  Fly   658 DTLKKLSN--------------NFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAAS---- 704
            ......:|              |...|...|:.|.:||.|.. ....|:..|.||.:..:|    
Human  1079 SNEDSAANGSAETSALDTGFSLNLSELREYTEGLTEAKEDDD-GDHSSLQSGQSVISLLSSEELK 1142

  Fly   705 -----FSKLKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPG 764
                 ...|...:|:.|.|:.:     .|:...:| .|||||:   ....|..:.:|.:..:.|.
Human  1143 KLIEEVKVLDEATLKQLDGIHV-----TILHKEEG-AGLGFSL---AGGADLENKVITVHRVFPN 1198

  Fly   765 GVAQLDGRLIPGDRLLFVNSINLENASLDQAVQALKGASKG-----VVRIGVAKPLPMTDNSLKA 824
            |:|..:|.:..|:.:|.:|..:|:..:...|:..|:.|.:.     |.|....:.:|..::|..:
Human  1199 GLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAMPDLNSSTDS 1263

  Fly   825 CSNASTTSEETLDAQPSPPALPTVAPPAMPPSASMG 860
            .::||..|:.::::  :...:.||....|  ||.:|
Human  1264 AASASAASDVSVES--TEATVCTVTLEKM--SAGLG 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 24/76 (32%)
PDZ_signaling 318..400 CDD:238492 37/127 (29%)
PDZ_signaling 557..643 CDD:238492 25/182 (14%)
PDZ_signaling 726..807 CDD:238492 20/85 (24%)
IL16NP_001339615.1 PDZ_signaling 268..351 CDD:238492 27/107 (25%)
PDZ_signaling 406..488 CDD:238492 27/85 (32%)
COG1615 <911..1006 CDD:332639 14/94 (15%)
PDZ_signaling 1162..1239 CDD:238492 20/85 (24%)
PDZ 1284..1370 CDD:214570 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4782
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.