DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patj and baz

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster


Alignment Length:989 Identity:208/989 - (21%)
Similarity:328/989 - (33%) Gaps:410/989 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QIEAVKKGIDESDDPKLQMQTAESL---------STILGILQDPVFRTIVHVQDSLSELNAQLAQ 68
            ::.|.::||     |..|:..:.||         ||...:..|. :.|:.|:|.....|:     
  Fly    26 KVAAKQEGI-----PHGQLHKSYSLTLPKRPPSPSTYSCVKPDS-WVTVTHLQTQSGILD----- 79

  Fly    69 HPSMLPNDFDIDVAGNLVLSLNGGEVMYDFDEQRSSSHSHSAPGSPDKSGGVGEEPRPQSQNSKG 133
                 |:|...|||.      :..:::..||:....      ||.| :.||.|    ....:|.|
  Fly    80 -----PDDCVRDVAD------DREQILAHFDDPGPD------PGVP-QGGGDG----ASGSSSVG 122

  Fly   134 AGVADLYATDYAQIQA-----------IELVNDGT----GLGFGIIGARNSGVIVKTILPGGVAD 183
            .|..|:: .|....:|           ||:.:..:    |||.|::..|:|              
  Fly   123 TGSPDIF-RDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSS-------------- 172

  Fly   184 KDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEPGTAVVP 248
                           |.||        .|.|:..|::.|        .|...|.||  .|.:  |
  Fly   173 ---------------DPNL--------LASLKAEGSNKR--------WSAAAPHYA--GGDS--P 202

  Fly   249 TRVLVDPA----------------ELERYLISTGYPEIFGESSTASTPQTTTEDDRFVYRGETSM 297
            .|:.:|.|                :|:..|:....|......|::...|.      |...|..||
  Fly   203 ERLFLDKAGGQLSPQWEEDDDPSHQLKEQLLHQQQPHAANGGSSSGNHQP------FARSGRLSM 261

  Fly   298 --LIDPN----IDLEELL----------------------------ALPETEKLQVEL------- 321
              |.|.|    ::..|.|                            :||...|.:..|       
  Fly   262 QFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRKEPLGQAYESI 326

  Fly   322 -KKD----------ANGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQS 375
             :||          .:.||:|.   :.:||...|:.|:.|.|||.|: .||:|.:|||:|::|..
  Fly   327 REKDGEMLLIINEYGSPLGLTA---LPDKEHGGGLLVQHVEPGSRAE-RGRLRRDDRILEINGIK 387

  Fly   376 LQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVAT 440
            |.|.:..|..|.|:::.:...||: |.|||.: .:.||..:...::...|..:|:|.|...||.|
  Fly   388 LIGLTESQVQEQLRRALESSELRV-RVLRGDR-NRRQQRDSKVAEMVEVATVSPTRKPHAAPVGT 450

  Fly   441 TSSATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKII 505
            :.....|                                                          
  Fly   451 SLQVANT---------------------------------------------------------- 457

  Fly   506 PTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFAVGGL 570
                                                   ||    :|..:|:::    |....||
  Fly   458 ---------------------------------------RK----LGRKIEIML----KKGPNGL 475

  Fly   571 GISLEGTVDVEGGREVRPHH---YIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAI 632
            |.|:....:..||      |   ||::|||.|....:|.|:.||.||||:|..:.|....:||||
  Fly   476 GFSVTTRDNPAGG------HCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAI 534

  Fly   633 LKELP--LDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADG 695
            |:.:|  ..||:|..|.                    :.|....|:  .|:....:|.|.|||. 
  Fly   535 LRGMPAGATVRIVVSRQ--------------------QELAEQADQ--PAEKSAGVAVAPSVAP- 576

  Fly   696 DSVAAAAA-----------------------------------SFSKLKSRSLEPLTGLAMWSSQ 725
            .:|.||||                                   |.|...:.||.|.:.  .|.|:
  Fly   577 PAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSN--SWHSR 639

  Fly   726 PQI-IELVKGD---RGLGFSI---------------------LDYQDPLDPNDTLIVIRSLVPGG 765
            .:: :.:...|   .|||.|:                     |...|    .|..|.:::::.||
  Fly   640 EELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHD----GDLGIFVKNVIHGG 700

  Fly   766 VAQLDGRLIPGDRLLFVNSINLENASLDQAVQALK-------GASKGVVRIGVAKPLPMTDNSLK 823
            .|..||||...|:||.||.::|...:..:|::.|:       |...|.:.:.|.:.:      |:
  Fly   701 AASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKI------LR 759

  Fly   824 ACSNASTTSEETLD 837
                 |.:|.:.||
  Fly   760 -----SASSSDILD 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425 14/65 (22%)
PDZ_signaling 154..226 CDD:238492 13/75 (17%)
PDZ_signaling 318..400 CDD:238492 30/99 (30%)
PDZ_signaling 557..643 CDD:238492 32/90 (36%)
PDZ_signaling 726..807 CDD:238492 26/112 (23%)
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 32/169 (19%)
PDZ_signaling 341..412 CDD:238492 27/75 (36%)
CRS1_YhbY <390..>436 CDD:294440 12/47 (26%)
PDZ_signaling 462..548 CDD:238492 33/95 (35%)
PDZ_signaling <686..753 CDD:238492 20/70 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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