Sequence 1: | NP_477342.1 | Gene: | Patj / 44100 | FlyBaseID: | FBgn0067864 | Length: | 871 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229284.1 | Gene: | Ush1c / 308596 | RGDID: | 1303329 | Length: | 910 | Species: | Rattus norvegicus |
Alignment Length: | 704 | Identity: | 143/704 - (20%) |
---|---|---|---|
Similarity: | 234/704 - (33%) | Gaps: | 230/704 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 SAPGSP----------DKSGGV-GEEPRPQSQNSKGAGVADLYATDYAQIQAIELVNDGTGLGFG 162
Fly 163 IIGA--RNSGVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHVRLVV 225
Fly 226 ARPVEQSVPTPQYALEPG---------------TAVVPTRVLVDPAELERY----LISTGYPEIF 271
Fly 272 GESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPET---EKLQVELKKDA-------- 325
Fly 326 NGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKK 390
Fly 391 SGQVVNLRLERYLRGPKFE------------------QLQQAIAANDKL-----------PSSA- 425
Fly 426 ------------------------------PGTPSRAP-------------MPTPVATTSSATTT 447
Fly 448 PSRSITRELEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLV-------------------A 493
Fly 494 VRDSLDGSTKIIPTEVVPLADKT------EAKNSGVIT---------RHKYYTDPELSDD----- 538
Fly 539 ----------AETEIIRKW------------QKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVE 581
Fly 582 GGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAILKE 635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Patj | NP_477342.1 | L27 | 12..70 | CDD:295425 | |
PDZ_signaling | 154..226 | CDD:238492 | 16/73 (22%) | ||
PDZ_signaling | 318..400 | CDD:238492 | 23/89 (26%) | ||
PDZ_signaling | 557..643 | CDD:238492 | 22/79 (28%) | ||
PDZ_signaling | 726..807 | CDD:238492 | |||
Ush1c | XP_006229284.1 | harmonin_N | 2..80 | CDD:259819 | |
PDZ_signaling | 85..165 | CDD:238492 | |||
PDZ_signaling | 209..289 | CDD:238492 | 20/93 (22%) | ||
Cgr1 | <316..>358 | CDD:281823 | 7/43 (16%) | ||
PDZ_signaling | 751..838 | CDD:238492 | 24/83 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |