DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patj and WHRN

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:XP_011516787.1 Gene:WHRN / 25861 HGNCID:16361 Length:918 Species:Homo sapiens


Alignment Length:921 Identity:190/921 - (20%)
Similarity:305/921 - (33%) Gaps:290/921 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSADISSALQQIEAVKKGIDESDDPKL---------QMQTAESLSTILGILQDPVFRTIVHVQDS 58
            |||::....|.:.|:   :.|::..:.         :....:.:.|:..:|..||.|.:      
Human    35 LSANVRQLHQALTAL---LSEAEREQFTHCLNAYHARRNVFDLVRTLRVLLDSPVKRRL------ 90

  Fly    59 LSELNAQLAQHPSMLPNDFDIDVAGNLVLSLNGGEVMYDFDEQRSSSHSHSAPGSPDKSGGVGEE 123
            |..|...:.:...:|   ||...|..|.|             ..::.:...|.|.|| |.|.|| 
Human    91 LPMLRLVIPRSDQLL---FDQYTAEGLYL-------------PATTPYRQPAWGGPD-SAGPGE- 137

  Fly   124 PRPQSQNSKGAGVADLYATDYAQIQAIELVNDGTGLGFGIIGARNSGV--IVKTILPGGVADKDG 186
                                 .::.::.......||||.|.|....||  .|..:.||.:|:|:|
Human   138 ---------------------VRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG 181

  Fly   187 RLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEPGTAVVPTRV 251
             ||.||.||::.|.:|..:...:....|:.|   .:||::......:|.........|.|.|...
Human   182 -LRVGDQILRVNDKSLARVTHAEAVKALKGS---KKLVLSVYSAGRIPGGYVTNHIYTWVDPQGR 242

  Fly   252 LVDPAELERYLISTGYPEIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEK 316
            .:.|        .:|.|:..|.:....      |.||      .|.|        .||...:.:|
Human   243 SISP--------PSGLPQPHGGALRQQ------EGDR------RSTL--------HLLQGGDEKK 279

  Fly   317 LQVELKKDANGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSN 381
            :.:.| .|...||:||.|   ..|...||::..|.|||.|:.|| ::|.|:|:||:|:|.....:
Human   280 VNLVL-GDGRSLGLTIRG---GAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILH 339

  Fly   382 HQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAAND--KLPSSAPGTPSRAPMPTPVATTSSA 444
            .:||.|||.|..::                   :...|  :||.:              .||...
Human   340 DEAVRLLKSSRHLI-------------------LTVKDVGRLPHA--------------RTTVDE 371

  Fly   445 TTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTTLSSFG-----AGKQLVAVRDSLDGSTKI 504
            |...:.|..|          |....:...:..:||..::..|     ||.|:..  .||...|::
Human   372 TKWIASSRIR----------ETMANSAGFLGDLTTEGINKPGFYKGPAGSQVTL--SSLGNQTRV 424

  Fly   505 IPTEVVPLADKTEAK---NSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFA 566
            :..|        :|:   |........||.|.........|.:          |..:...:...|
Human   425 LLEE--------QARHLLNEQEHATMAYYLDEYRGGSVSVEAL----------VMALFKLLNTHA 471

  Fly   567 VGGLGISLEGTV---DVEG------GREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLL 622
            ...|...:.||:   |:|.      .||:..   :::..|.||       .:||....|:..   
Human   472 KFSLLSEVRGTISPQDLERFDHLVLRREIES---MKARQPPGP-------GAGDTYSMVSYS--- 523

  Fly   623 GMNHLEVVAILKELPLDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLA 687
                            |.....|.:..|:.:..:.:.|..|.:..||.|             .|.
Human   524 ----------------DTGSSTGSHGTSTTVSSARERLLWLIDLMENTL-------------DLE 559

  Fly   688 TAGSVADGDSVAAAAASFSKLKSRSLEPLTGLAMWSSQPQIIELVKGD-------RGLGFSILDY 745
            ..|....|:..|....|...::|.|    .||:.:...|:...|.:|:       |.||      
Human   560 ETGEAVQGNINALPDVSVDDVRSTS----QGLSSFKPLPRPPPLAQGNDLPLGQPRKLG------ 614

  Fly   746 QDPLDPNDTLIVIRSLVPGGVAQLDGRLIPGDRLLFVNSINLENASLDQAVQALKGASKGVVRIG 810
            ::.|.|           |..:....|.:....          :|.|.........|.|.      
Human   615 REDLQP-----------PSSMPSCSGTVFSAP----------QNRSPPAGTAPTPGTSS------ 652

  Fly   811 VAKPLPMTDNSLKACSNASTTSEETLDAQ---------------PSPPALPTVAPPA-------M 853
             |:.|| :.....:.|.|:.:|:..|||.               .|||.|.:.:..|       :
Human   653 -AQDLP-SSPIYASVSPANPSSKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPSAEATVAGGCLL 715

  Fly   854 PPSASMGAEPD 864
            |||.|  ..||
Human   716 PPSPS--GHPD 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425 10/66 (15%)
PDZ_signaling 154..226 CDD:238492 26/73 (36%)
PDZ_signaling 318..400 CDD:238492 30/81 (37%)
PDZ_signaling 557..643 CDD:238492 15/94 (16%)
PDZ_signaling 726..807 CDD:238492 14/87 (16%)
WHRNXP_011516787.1 HN_L-whirlin_R1_like 37..112 CDD:259822 14/86 (16%)
PDZ_signaling 138..215 CDD:238492 24/80 (30%)
PDZ_signaling 277..357 CDD:238492 31/103 (30%)
HN_L-whirlin_R2_like 419..499 CDD:259823 15/97 (15%)
PDZ_signaling 827..898 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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