DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and Stxbp4

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_035635.1 Gene:Stxbp4 / 20913 MGIID:1342296 Length:557 Species:Mus musculus


Alignment Length:564 Identity:111/564 - (19%)
Similarity:202/564 - (35%) Gaps:149/564 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 VNDGTGLGFGIIGA--RNSG--VIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAV 213
            |...||||..|:|.  ||.|  |.:..::|||...|||||:.||.::.|...::..:..|:..::
Mouse    25 VTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSI 89

  Fly   214 LRQSGTHVRLVVARPVEQS---------------VPTPQYALEPGTAVVPTRVLVDPAELERYLI 263
            :    |..:|....|.|.:               .|:||.:.:.|.......:|..|:|      
Mouse    90 I----TRAKLRSESPWEIAFIRQKSYCGHPGNICCPSPQVSEDCGPQTSTFTLLSSPSE------ 144

  Fly   264 STGYPEIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGL 328
             |..|:      |:||||  |:|..|                      |..:.:|.:.:.|    
Mouse   145 -TLLPK------TSSTPQ--TQDSTF----------------------PSCKAIQTKPEHD---- 174

  Fly   329 GITIAGYVCEKEELSGIFVKSVSPG--SAADLS-----------GRIRVNDRIIEVDGQSLQGYS 380
                      |.|.|.|.....||.  |.||::           |:|.:|.. :.:..:.|:...
Mouse   175 ----------KTEHSPITSLDNSPADTSNADIAPAWTDDDSGPQGKISLNPS-VRLKAEKLEMAL 228

  Fly   381 NHQAVELLKKSGQVVNLRLERYLRGP----KFEQLQQAI--AANDKLPSSAPGTPSRAPMPTPVA 439
            |:..::..|:..:.:..:::...:|.    .|.|:.:::  ...|::.......||         
Mouse   229 NYLGIQPTKEQREALREQVQADSKGTVSFGDFVQVARSLFCLQLDEVNVGVHEIPS--------- 284

  Fly   440 TTSSATTTPSRSITRE----LEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDG 500
             ...:...|..|:..:    |.:|...|.|       ....:....|.|....|||:....::..
Mouse   285 -ILDSQLLPCDSLEADEVGKLRQERNAALE-------ERNVLKEKLLESEKHRKQLIEELQNVKQ 341

  Fly   501 STKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKF 565
            ..|.:..|...|..:.....:.....|....|.|       |:||    ::.::|..:.||:..:
Mouse   342 EAKAVAEETRALRSRIHLAEAAQRQAHGMEMDYE-------EVIR----LLEAEVSELKAQLADY 395

  Fly   566 AVGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVV 630
            :          ..:.|..:::|.    |..:.|..:..:.:.|   :..:.:.|||||.     :
Mouse   396 S----------DQNKESVQDLRK----RVTVLDCQLRKSEMAR---KAFKASTERLLGF-----I 438

  Fly   631 AILKELPLDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPAT 674
            ..::|:.||.............:..|..:|..|:.|..: .|||
Mouse   439 EAIQEVLLDSSAPLSTLSERRAVLASQTSLPLLARNGRS-FPAT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 24/75 (32%)
PDZ_signaling 318..400 CDD:238492 17/94 (18%)
PDZ_signaling 557..643 CDD:238492 15/85 (18%)
PDZ_signaling 726..807 CDD:238492
Stxbp4NP_035635.1 PDZ_signaling 21..94 CDD:238492 24/72 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..214 26/122 (21%)
Luteo_P1-P2 <189..393 CDD:285641 38/232 (16%)
WW 502..531 CDD:278809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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