DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and Stxbp4

DIOPT Version :10

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_035635.1 Gene:Stxbp4 / 20913 MGIID:1342296 Length:557 Species:Mus musculus


Alignment Length:564 Identity:111/564 - (19%)
Similarity:202/564 - (35%) Gaps:149/564 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 VNDGTGLGFGIIGA--RNSG--VIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAV 213
            |...||||..|:|.  ||.|  |.:..::|||...|||||:.||.::.|...::..:..|:..::
Mouse    25 VTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSI 89

  Fly   214 LRQSGTHVRLVVARPVEQS---------------VPTPQYALEPGTAVVPTRVLVDPAELERYLI 263
            :    |..:|....|.|.:               .|:||.:.:.|.......:|..|:|      
Mouse    90 I----TRAKLRSESPWEIAFIRQKSYCGHPGNICCPSPQVSEDCGPQTSTFTLLSSPSE------ 144

  Fly   264 STGYPEIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGL 328
             |..|:      |:||||  |:|..|                      |..:.:|.:.:.|    
Mouse   145 -TLLPK------TSSTPQ--TQDSTF----------------------PSCKAIQTKPEHD---- 174

  Fly   329 GITIAGYVCEKEELSGIFVKSVSPG--SAADLS-----------GRIRVNDRIIEVDGQSLQGYS 380
                      |.|.|.|.....||.  |.||::           |:|.:|.. :.:..:.|:...
Mouse   175 ----------KTEHSPITSLDNSPADTSNADIAPAWTDDDSGPQGKISLNPS-VRLKAEKLEMAL 228

  Fly   381 NHQAVELLKKSGQVVNLRLERYLRGP----KFEQLQQAI--AANDKLPSSAPGTPSRAPMPTPVA 439
            |:..::..|:..:.:..:::...:|.    .|.|:.:::  ...|::.......||         
Mouse   229 NYLGIQPTKEQREALREQVQADSKGTVSFGDFVQVARSLFCLQLDEVNVGVHEIPS--------- 284

  Fly   440 TTSSATTTPSRSITRE----LEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDG 500
             ...:...|..|:..:    |.:|...|.|       ....:....|.|....|||:....::..
Mouse   285 -ILDSQLLPCDSLEADEVGKLRQERNAALE-------ERNVLKEKLLESEKHRKQLIEELQNVKQ 341

  Fly   501 STKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKF 565
            ..|.:..|...|..:.....:.....|....|.|       |:||    ::.::|..:.||:..:
Mouse   342 EAKAVAEETRALRSRIHLAEAAQRQAHGMEMDYE-------EVIR----LLEAEVSELKAQLADY 395

  Fly   566 AVGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVV 630
            :          ..:.|..:::|.    |..:.|..:..:.:.|   :..:.:.|||||.     :
Mouse   396 S----------DQNKESVQDLRK----RVTVLDCQLRKSEMAR---KAFKASTERLLGF-----I 438

  Fly   631 AILKELPLDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPAT 674
            ..::|:.||.............:..|..:|..|:.|..: .|||
Mouse   439 EAIQEVLLDSSAPLSTLSERRAVLASQTSLPLLARNGRS-FPAT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:470651
PDZ2_MUPP1-like 148..227 CDD:467155 25/77 (32%)
PDZ3_MUPP1-like 315..401 CDD:467253 17/98 (17%)
PDZ4_MUPP1-like 556..646 CDD:467156 15/89 (17%)
PDZ5_MUPP1-like 719..816 CDD:467157
Stxbp4NP_035635.1 PDZ1_hSTXBP4-PDZ2_GgSTXBP4-like 19..107 CDD:467184 27/85 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..214 26/122 (21%)
Smc <299..>443 CDD:440809 31/183 (17%)
WW 503..533 CDD:238122
Blue background indicates that the domain is not in the aligned region.

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