DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and C46H11.6

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_491502.1 Gene:C46H11.6 / 183523 WormBaseID:WBGene00016730 Length:342 Species:Caenorhabditis elegans


Alignment Length:395 Identity:81/395 - (20%)
Similarity:135/395 - (34%) Gaps:118/395 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 ETEKLQVELKKDANGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQ 377
            ||..:.|..|.|...:| ..|..|....|.|  .|..:|..|.  .:|.| ::|:|::|:|.|  
 Worm    26 ETVNMTVSFKIDEKDVG-KPANEVIRINENS--MVSFLSTNSF--YNGLI-LSDKIVKVNGAS-- 82

  Fly   378 GYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTS 442
            |..:....||:|  |:..::.:.|                   ..:..|.|..|......|....
 Worm    83 GNISKYQTELMK--GETCSVEVTR-------------------RKNIIPATRERLKKSGCVLRRD 126

  Fly   443 SATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTTLSS--FGAGKQLVAVRDSLDGSTKII 505
            :.........|..::...:.....::.....||.:..::|:|  ||.|..::.:.:         
 Worm   127 NTCFVIEVEKTSAMKSATVGVTVTYIQKRGIVTRIEPSSLASIFFGRGDLIMDINE--------- 182

  Fly   506 PTEVVPLADKTE----AKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFA 566
              |.:..|:|.:    .|.||::                     |.:|:.             |.
 Worm   183 --ESILNAEKNDDFIREKLSGIL---------------------KGEKVT-------------FL 211

  Fly   567 VGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMN----HL 627
            |       |..|.||....:|  |.|.|:.||..|.:            .|....:|.|    |.
 Worm   212 V-------ERPVSVESANTLR--HLIESVAPDPDVKM------------ANDAICIGRNASNMHY 255

  Fly   628 EVVAILKELPLDVRMVC-GRNRNSSLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGS 691
            .|:..|:...:..|.|. |:|      |......||||...:|    |.::..|.|..:::|  .
 Worm   256 NVLKKLQPKSILSRDVFKGKN------PREKKPGKKLSKEKDN----TIKISTATSTANIST--D 308

  Fly   692 VADGD 696
            ||:.:
 Worm   309 VAEDE 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492
PDZ_signaling 318..400 CDD:238492 23/81 (28%)
PDZ_signaling 557..643 CDD:238492 20/89 (22%)
PDZ_signaling 726..807 CDD:238492
C46H11.6NP_491502.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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