DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and T19B10.5

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_505852.3 Gene:T19B10.5 / 179553 WormBaseID:WBGene00011833 Length:596 Species:Caenorhabditis elegans


Alignment Length:537 Identity:115/537 - (21%)
Similarity:189/537 - (35%) Gaps:158/537 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VAGNLVLSLNGGEVMY----------DFDEQRSSSHSHSAPGSPDKSGGVGEEPRPQSQNS---- 131
            ||...::|.....::|          :.||:  |::::.|....||....     |:|.|.    
 Worm    38 VAAAFLISAALAIILYIWYRRSSTIRETDEK--SAYANDACDVEDKGCDA-----PKSINKDKMT 95

  Fly   132 -----------KGAGVADLYATDY---------AQIQAIELVNDGTGLGFGIIGARNSGVIVKTI 176
                       :.:|....|:.::         .|::.:::    .||||.|.|..|.|:.||.|
 Worm    96 MIDSFKLKRKMEDSGTQKAYSMEFLNEVEGKVGVQLRGVDI----GGLGFNIQGNMNEGIFVKEI 156

  Fly   177 LPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTH-VRLVVARPVEQSVPTPQYAL 240
            :..|:|::.|.:..||.|..: .:|...||.|....:|..|..: |:|.:.|.:..|........
 Worm   157 ISKGIAEQCGNILVGDKIKSL-TINFENMVYEDAVTLLSYSSPYKVKLELERKLSDSASVSDSDD 220

  Fly   241 EPGTAVVP-------TRVLVDPAELERYLISTGYPEIFGESSTASTPQTTTEDD----------R 288
            :......|       |.|..:|..    .|||       .:|.|:|||..|..|          |
 Worm   221 DKEMRYHPLFRSNTLTHVHFNPLG----TIST-------PTSIATTPQRCTSTDSKQKHALPPQR 274

  Fly   289 FVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIAGYVCEKEELSGIFVKSVSPG 353
            .:...:::...|.|                 ...:||:...:..:.|  ..:.:|.....:.|.|
 Worm   275 EIIEPDSTTCADDN-----------------SQARDADNSRMDSSDY--GSDGISDCRESTASDG 320

  Fly   354 SAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAAN 418
            :...||.||.|.|.|.:                 ..||.....||        |.||..:.....
 Worm   321 TQKTLSDRIEVTDIIFD-----------------KVKSPTPPPLR--------KLEQCTELPPKP 360

  Fly   419 DKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTT-- 481
            .|:.|.:| :|...|.|:|..   |..|:|.:|  :::|:..       .||..|..|..|.|  
 Worm   361 RKMVSRSP-SPVNKPPPSPKV---SRATSPKKS--QQVEDST-------QTTQLSAETRPTQTEK 412

  Fly   482 --------LSSFGAGKQLVAVRDSLDGSTKIIP---------TEVVPLADKTEAKNSGVITRHKY 529
                    :||       :.||..::..||..|         .|:.|:..|.:......||..:.
 Worm   413 PIAPVPPPISS-------IPVRKEMETQTKTPPPDQTVVEKIVEIAPVEIKEDDSKGPEITEARI 470

  Fly   530 YTDPELSDDAETEIIRK 546
            ...|:.||..:|.:|.:
 Worm   471 SRIPKRSDSIKTPVIER 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 25/72 (35%)
PDZ_signaling 318..400 CDD:238492 17/81 (21%)
PDZ_signaling 557..643 CDD:238492
PDZ_signaling 726..807 CDD:238492
T19B10.5NP_505852.3 PDZ 137..208 CDD:214570 25/71 (35%)
PTZ00449 <340..483 CDD:185628 40/170 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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