DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and FRMPD2

DIOPT Version :10

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:XP_054220869.1 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1395 Species:Homo sapiens


Alignment Length:883 Identity:175/883 - (19%)
Similarity:283/883 - (32%) Gaps:322/883 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SSSHSHSAPGSPDKSG-GVGEEP--------------RPQSQNS-KGAGVADLYATDY------- 144
            :|..:.:..||.:... |:|..|              :|.:.:| .|..|..::|...       
Human   701 TSMDNFNVDGSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSF 765

  Fly   145 -----AQIQAIELVNDGTGLGFGII-------GARNSGVIVKTILPGGVADKDGRLRSGDHILQI 197
                 .:|..:.|..| ...|||.:       |..:.|:.:.:|:|||.|:|...::.|..||.:
Human   766 IAEPGREIVRVTLKRD-PHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILAL 829

  Fly   198 GDVNLHEMVSEQVAAVLRQSGTHVRLVVAR--------PVEQSVPTPQYALEPGTAVVPTRVLVD 254
            ..::|..........:::.|..::.|::::        |.|:                       
Human   830 NHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEE----------------------- 871

  Fly   255 PAELERYLISTGYPEIFGESSTASTPQTTTEDDRFVYRGE-TSMLIDPNIDLEEL---------- 308
                              ::|||::..::|:...|.|:|. .|...|.:.:.|||          
Human   872 ------------------KNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVP 918

  Fly   309 --------LAL-----------PET---EKLQVELKKDANGLGITIAGYVCEKEELSGIFVKSVS 351
                    |.|           ||.   |...|||.|:...||.::.|.:.......||:|||:.
Human   919 RLRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIV 983

  Fly   352 PGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIA 416
            ||..|...|:|...||:::|||..|.|.::.|||:.||..|||..|.|||  |.|:  ..||..:
Human   984 PGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLKGPGQVARLVLER--RVPR--STQQCPS 1044

  Fly   417 ANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTT 481
            |||.:....             ...|..|..|.|                    |.|..::|   
Human  1045 ANDSMGDER-------------TAVSLVTALPGR--------------------PSSCVSVT--- 1073

  Fly   482 LSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRK 546
                             ||             .|.|.|                           
Human  1074 -----------------DG-------------PKFEVK--------------------------- 1081

  Fly   547 WQKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVEGGREVRPH-----HYIRSILPDGPVGVNGV 606
                           :||.| .|||.|.     |:..:|...|     ..|:.:.|..|...||.
Human  1082 ---------------LKKNA-NGLGFSF-----VQMEKESCSHLKSDLVRIKRLFPGQPAEENGA 1125

  Fly   607 LRSGDELLEVNGERLLGMNHLEVVAILKELPLDVRMVCGRNRNSSLLPFSDDTLKKLSNNFEN-L 670
            :.:||.:|.|||....|:...||:.:|:..|.:|.::..|.        ....|.:|...::. .
Human  1126 IAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCRP--------PPGALPELEQEWQTPE 1182

  Fly   671 LPATDRLVKAKSDGSLATAGSVAD-----GDSVAAAAASFSKLKSRSLEPLTGLAMW-------- 722
            |.|.....:|....|..:  .:.|     .||.:..|.....|:..|.:.....|.|        
Human  1183 LSADKEFTRATCTDSCTS--PILDQEDSWRDSASPDAGEGLGLRPESSQKAIREAQWGQNRERPW 1245

  Fly   723 --------SSQPQIIEL--VKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLDGRLIPGD 777
                    .|.|.:.:|  .:.:..|..|:     ..|.......:..::..|..:|||....||
Human  1246 ASSLTHSPESHPHLCKLHQERDESTLATSL-----EKDVRQNCYSVCDIMRLGSPELDGEDGEGD 1305

  Fly   778 RLLFVNSINLENASLDQAVQALKGASKGVVRIGVAKPLPMTDN----SLKACSNASTTSEETLDA 838
                              :....||           |.|.:::    ::.:........||.|:|
Human  1306 ------------------MYHPCGA-----------PSPTSEDEEYLTINSTCQGQLPCEECLEA 1341

  Fly   839 QPSPPALPT-----VAPPAMPPSASMGAEPDLIPDWRN 871
            ......||.     ..|.::||..|    |:...:|.:
Human  1342 DSGTIPLPQFCSWGTVPESLPPEES----PESGSEWED 1375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:470651
PDZ2_MUPP1-like 148..227 CDD:467155 19/85 (22%)
PDZ3_MUPP1-like 315..401 CDD:467253 35/85 (41%)
PDZ4_MUPP1-like 556..646 CDD:467156 27/94 (29%)
PDZ5_MUPP1-like 719..816 CDD:467157 17/114 (15%)
FRMPD2XP_054220869.1 KIND 15..197 CDD:214801
FERM_F1_FRMPD2 341..434 CDD:340716
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008
PDZ_canonical 772..863 CDD:483948 20/91 (22%)
PDZ2-PTPN13_FRMPD2-like 947..1033 CDD:467254 35/85 (41%)
PDZ3_PTPN13_FRMPD2-like 1078..1166 CDD:467181 29/135 (21%)
Blue background indicates that the domain is not in the aligned region.

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