DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patj and FRMPD2

DIOPT Version :9

Sequence 1:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster
Sequence 2:NP_001018081.4 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1309 Species:Homo sapiens


Alignment Length:625 Identity:132/625 - (21%)
Similarity:209/625 - (33%) Gaps:241/625 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SSSHSHSAPGSPDKSG-GVGEEP--------------RPQSQNS-KGAGVADLYATDY------- 144
            :|..:.:..||.:... |:|..|              :|.:.:| .|..|..::|...       
Human   701 TSMDNFNVDGSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSF 765

  Fly   145 -----AQIQAIELVNDGTGLGFGII-------GARNSGVIVKTILPGGVADKDGRLRSGDHILQI 197
                 .:|..:.|..| ...|||.:       |..:.|:.:.:|:|||.|:|...::.|..||.:
Human   766 IAEPGREIVRVTLKRD-PHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILAL 829

  Fly   198 GDVNLHEMVSEQVAAVLRQSGTHVRLVVAR--------PVEQSVPTPQYALEPGTAVVPTRVLVD 254
            ..::|..........:::.|..::.|::::        |.|:                       
Human   830 NHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEE----------------------- 871

  Fly   255 PAELERYLISTGYPEIFGESSTASTPQTTTEDDRFVYRGE-TSMLIDPNIDLEEL---------- 308
                              ::|||::..::|:...|.|:|. .|...|.:.:.|||          
Human   872 ------------------KNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVP 918

  Fly   309 --------LAL-----------PET---EKLQVELKKDANGLGITIAGYVCEKEELSGIFVKSVS 351
                    |.|           ||.   |...|||.|:...||.::.|.:.......||:|||:.
Human   919 RLRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIV 983

  Fly   352 PGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIA 416
            ||..|...|:|...||:::|||..|.|.::.|||:.|...|||..|.|||  |.|:  ..||..:
Human   984 PGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLER--RVPR--STQQCPS 1044

  Fly   417 ANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTT 481
            |||.:....             ...|..|..|.|                    |.|..::|   
Human  1045 ANDSMGDER-------------TAVSLVTALPGR--------------------PSSCVSVT--- 1073

  Fly   482 LSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRK 546
                             ||             .|.|.|                           
Human  1074 -----------------DG-------------PKFEVK--------------------------- 1081

  Fly   547 WQKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVEGGREVRPH-----HYIRSILPDGPVGVNGV 606
                           :||.| .|||.|.     |:..:|...|     ..|:.:.|..|...||.
Human  1082 ---------------LKKNA-NGLGFSF-----VQMEKESCSHLKSDLVRIKRLFPGQPAEENGA 1125

  Fly   607 LRSGDELLEVNGERLLGMNHLEVVAILKELPLDVRMVCGR 646
            :.:||.:|.|||....|:...||:.:|:..|.:|.::..|
Human  1126 IAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCR 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 18/78 (23%)
PDZ_signaling 318..400 CDD:238492 32/81 (40%)
PDZ_signaling 557..643 CDD:238492 27/90 (30%)
PDZ_signaling 726..807 CDD:238492
FRMPD2NP_001018081.4 KIND 15..197 CDD:214801
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..302
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008
PDZ_signaling 773..857 CDD:238492 20/84 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..880 5/61 (8%)
PDZ 947..1034 CDD:214570 36/88 (41%)
PDZ 1078..1167 CDD:214570 30/136 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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